Gene
| Gene Model ID | pfu_aug2.0_1052.1_08138 |
|---|---|
| Locus | scaffold1052.1 : 179766 ... 198693 : + |
| To GenomeBrowser | scaffold1052.1:179766..198693 |
| Genes list of scaffold | scaffold1052.1 |
| Synonym | pfu_aug1.0_18387.1_61817 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1052.1_08138.t1 | 4 | 1 | TPR_12 | 29 | 100 | 1.4e-17 | 63.3 | 3.9e-08 | 4.9e-05 | 23.1 |
| pfu_aug2.0_1052.1_08138.t1 | 7 | 1 | TPR_2 | 31 | 51 | 6.6e-11 | 41.2 | 0.0073 | 9.0 | 6.4 |
| pfu_aug2.0_1052.1_08138.t1 | 7 | 1 | TPR_1 | 31 | 49 | 1.1e-07 | 31.0 | 0.04 | 50.0 | 3.7 |
| pfu_aug2.0_1052.1_08138.t1 | 4 | 1 | TPR_11 | 32 | 98 | 2.0e-07 | 30.5 | 0.00075 | 0.93 | 9.1 |
| pfu_aug2.0_1052.1_08138.t1 | 7 | 2 | TPR_2 | 69 | 94 | 6.6e-11 | 41.2 | 0.0034 | 4.2 | 7.5 |
| pfu_aug2.0_1052.1_08138.t1 | 7 | 2 | TPR_1 | 70 | 99 | 1.1e-07 | 31.0 | 0.0032 | 4.0 | 7.2 |
| pfu_aug2.0_1052.1_08138.t1 | 4 | 2 | TPR_12 | 137 | 197 | 1.4e-17 | 63.3 | 3.4e-05 | 0.042 | 13.7 |
| pfu_aug2.0_1052.1_08138.t1 | 7 | 3 | TPR_2 | 137 | 152 | 6.6e-11 | 41.2 | 0.34 | 420.0 | 1.2 |
| pfu_aug2.0_1052.1_08138.t1 | 7 | 3 | TPR_1 | 137 | 152 | 1.1e-07 | 31.0 | 0.027 | 33.0 | 4.2 |
| pfu_aug2.0_1052.1_08138.t1 | 4 | 2 | TPR_11 | 137 | 197 | 2.0e-07 | 30.5 | 0.0001 | 0.13 | 11.9 |
| pfu_aug2.0_1052.1_08138.t1 | 7 | 4 | TPR_2 | 167 | 197 | 6.6e-11 | 41.2 | 0.00049 | 0.6 | 10.1 |
| pfu_aug2.0_1052.1_08138.t1 | 7 | 4 | TPR_1 | 167 | 197 | 1.1e-07 | 31.0 | 0.0031 | 3.8 | 7.2 |
| pfu_aug2.0_1052.1_08138.t1 | 4 | 3 | TPR_12 | 1087 | 1159 | 1.4e-17 | 63.3 | 7.6e-09 | 9.4e-06 | 25.4 |
| pfu_aug2.0_1052.1_08138.t1 | 7 | 5 | TPR_1 | 1091 | 1116 | 1.1e-07 | 31.0 | 0.12 | 150.0 | 2.2 |
| pfu_aug2.0_1052.1_08138.t1 | 7 | 5 | TPR_2 | 1092 | 1116 | 6.6e-11 | 41.2 | 0.054 | 66.0 | 3.7 |
| pfu_aug2.0_1052.1_08138.t1 | 4 | 3 | TPR_11 | 1092 | 1159 | 2.0e-07 | 30.5 | 0.0059 | 7.3 | 6.3 |
| pfu_aug2.0_1052.1_08138.t1 | 7 | 6 | TPR_2 | 1131 | 1159 | 6.6e-11 | 41.2 | 0.00067 | 0.83 | 9.7 |
| pfu_aug2.0_1052.1_08138.t1 | 7 | 6 | TPR_1 | 1131 | 1159 | 1.1e-07 | 31.0 | 0.00023 | 0.29 | 10.8 |
| pfu_aug2.0_1052.1_08138.t1 | 4 | 4 | TPR_12 | 1203 | 1224 | 1.4e-17 | 63.3 | 0.0049 | 6.0 | 6.8 |
| pfu_aug2.0_1052.1_08138.t1 | 4 | 4 | TPR_11 | 1203 | 1224 | 2.0e-07 | 30.5 | 0.00038 | 0.47 | 10.1 |
| pfu_aug2.0_1052.1_08138.t1 | 7 | 7 | TPR_2 | 1204 | 1224 | 6.6e-11 | 41.2 | 0.00011 | 0.14 | 12.1 |
| pfu_aug2.0_1052.1_08138.t1 | 7 | 7 | TPR_1 | 1205 | 1224 | 1.1e-07 | 31.0 | 0.00025 | 0.31 | 10.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1052.1_08138.t1 | gi|524886732|ref|XP_005099958.1| | PREDICTED: tonsoku-like protein-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1052.1_08138.t1 | gi|260833879|ref|XP_002611939.1| | hypothetical protein BRAFLDRAFT_126413 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1052.1_08138.t1 | gi|676493569|ref|XP_009066281.1| | hypothetical protein LOTGIDRAFT_169742 [Lottia gigantea] | 5.60519e-45 |
| pfu_aug2.0_1052.1_08138.t1 | gi|260819000|ref|XP_002604670.1| | hypothetical protein BRAFLDRAFT_94832 [Branchiostoma floridae] | 9.94922e-44 |
| pfu_aug2.0_1052.1_08138.t1 | gi|573896145|ref|XP_006635814.1| | PREDICTED: tonsoku-like protein-like [Lepisosteus oculatus] | 3.99931e-42 |
Transcript
| Transcript ID | pfu_aug2.0_1052.1_08138.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1052.1_08138.t1 atggacagagaagatgaaagagaatttgagagactgaagcgagacaagagaaagtctgacaagaaagggaacttgaagga agtttcacagatatgtaattatatgggagaaatattggccaagtatggcaaatgggaagacgcaaagaaggaacatgaaa tggaattgtctctctgcgaggcgctttgtgacacaataggctgtgccatcgcgtgtcgtaaaataggcgagtgtttctgt gggctagagcagtacgagaaggccctgaattaccaacagcgccatctgtctctggccagatcgtgtaaaagtctgttgga ggagcagcgagctttagcgacaattggacggacgtacttgatacagagtgacacagccaaggggaacgatgctctgatga aggtttcacagaaagccgaggaatcctttaagaaaagtctagaagtttgtgagaatttgaggagggaggtgaaaccgtta gaatatatggagatgaaagcaagattgtatctgaatttaggactggtatatgactgtcagttaaaagttaccgagtgtgc agagtatatgaagaaggccatttctatagcacatctaagtaacgttttggacgagttatttgcaatacacagctcagaat tacgcatcgcctatttaagcgctaaaaacaccaagttcttatcacgtatgttatacatgaaaggatttgcgcggggtcaa atcctcattaatatgcatgaaattaacaggccaatcagtgtttcaagattctctctccaactccaattggtactggcagt gctttcactggtatggagaatggagacgtatcctgggccattctgtaaatccttgggcctcagtgaagatcacctccgtg aatttaaagctggagctatacaaacagaaaacattacaaatggactcatacttgaattgagaaccttttatgatggtaga tttcccgacatttttaagtgcctttccttacttaatccaaattgtgagcagctcaatggtgggaccctgaactcaaggat aaacagactatgtgacgttaaacgaaaactaagagccaagaaaaaagtgaaagaattcagaacactacaggaattcattg ataatcaatttgtgttagagactccatcttcgagaaatgatgaggctaataaaactttggaccctctctctcttccaagt gcgttcccctcatctccagtacgcaatggtgaggaatgtgtaccgttacacgaagagaccaggataggagatgaagtatg gctcattcaggacaatgaaaagaaaagtgaaaaaattaagaaccctagtgtgatcaaagaagaacaagtaaaacttgtgc atttagagagacgatggggccattattctgtgcgaaatgtcaataagcgtgatgaaatgaataaaaggaatcttttcaag tttcgagaagcccagagagcgctaggaaagcatgtcaagggaaacaaggcactgcgtgatacaaatgcaaagctgaaagc cgatgtgaaacttttgaatagtgaaaatgtaaaactcaagttagcaatggaaaaattatcagatgaccttgcagtggcag aaaagaagaaagtagcagcacagaaatatgctagcaagaacaaactttcgcgtcgaaatatcatggggacaatgatggaa aaacttgaaggaggcgcagacaagacagacaagagcaaagtagcatgtgagaaagtgtctcctgtcatcacagcagttgc cagaaacatctttggcaaagaattatcaaagactgatttaccatcaagttcaacagtgcagacaatcattgatgagggac attacttggcaaagtcctatgtttcagaagctctaatcaacagccccaattggggattgcacagggatggtacaacccgc cgcaaacaaaagatcttggacacttctgtgacgctgtctactggtgatgtcatgagtctaggattcacacgtgtagctag agaaacatcttcagccattcatgatgtcactactcagcacttacatgagttggcttcgctatttgatgaaaatactgatg tgtctagagattatatcaaagagaccttgcagaaactggcttttactatgagtgacagagctgcaaacgagaaaaaggcc aacactttgcttgatgaatggcgagacgacatcctgtcacaatgtccagatgctgaaaaaccagaagttttcgcatttca ctgtatggctcattctctccttggttttcatacgtacgcctgtaagaaactcaaaggaactgtacttgaaagggttgtca gaaccacatcagaaatatttggaccagctggagaccaccatggtgtgtgggaccaatgggaagccttctgctctacaaat ggagttaagtcgatcataggtaattaccgtgacaatcgtttcaatgccatctttcaaacagctgtggagatcatggtgca tagaaaggactttatttccattttggacaagacaaagccacagaatctaaaaattcaggccgtggtagcagaccttaaaa gtgacgtgaattcagtgcttcttcagtgttatggactaatgtatgttaaagtcacaagaccgtactggaacatgattaca acagcagacgtgtcataccttcaacttcatacccatatagtaagcctaaagagcttcctggagaagtgtgcaaccatcac tacagtcagcaaagcgttgattgatactattgacaagcagctcgtggactttttgccaggaggaaagtacagccaatctt tagatgatcaaactatgacaaagctccactttgcaccattgacaaacctaagttgtgagcaccattttggtgacttggat agtagtcaaagaaggagacctagtgcatctatgcatcaccactcatcaatacagctgctgaaaaggaacagaaagaaaat gatttcttggttcaaatctttatctgatgcaaagaagaccgagatgatgaagaaggctcgaagcggaggcaaaaagttgc gggaggtaaatttacagaaggagagggaggttttagcagaaattcactccaatttgcagaatgagtcgcagccaagtggt aaaaggaagtctactgctaaccatggtcagcaacaaagaagtcgacgacgaacagaatcaacaccatgtgaagattctct caaggacaaacttgcgaagaaggaggacatcctggtcaatacgcagcacaaactagacagtgatctgtacagatgtcagt attccttggccagcatgtatcaacgagcaggaaatctgagtcagggtctgcggtatctggaagctgcacaatcatcagcc gtcaaactaaaggacaaatacatggagagtgaggcccttactcagaaggcaataatacacttgcagttaggagattactc cacatgtaaacactccctgaagaaagctcacaaacttggatccaccactgaagaagaagctgacaagatcaaaaagtgct tcaaagctgcgtctaagatagaggaggcatcagagagtttggagagctgcccagtatcaccgtccgatacccgtatgtca ttatttgagaccctcggagactgcgcagcggaagctggatgttacaagcaggccatagagtactatcagaaaatg |
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Protein
| Protein ID | pfu_aug2.0_1052.1_08138.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1052.1_08138.t1 MDREDEREFERLKRDKRKSDKKGNLKEVSQICNYMGEILAKYGKWEDAKKEHEMELSLCEALCDTIGCAIACRKIGECFC GLEQYEKALNYQQRHLSLARSCKSLLEEQRALATIGRTYLIQSDTAKGNDALMKVSQKAEESFKKSLEVCENLRREVKPL EYMEMKARLYLNLGLVYDCQLKVTECAEYMKKAISIAHLSNVLDELFAIHSSELRIAYLSAKNTKFLSRMLYMKGFARGQ ILINMHEINRPISVSRFSLQLQLVLAVLSLVWRMETYPGPFCKSLGLSEDHLREFKAGAIQTENITNGLILELRTFYDGR FPDIFKCLSLLNPNCEQLNGGTLNSRINRLCDVKRKLRAKKKVKEFRTLQEFIDNQFVLETPSSRNDEANKTLDPLSLPS AFPSSPVRNGEECVPLHEETRIGDEVWLIQDNEKKSEKIKNPSVIKEEQVKLVHLERRWGHYSVRNVNKRDEMNKRNLFK FREAQRALGKHVKGNKALRDTNAKLKADVKLLNSENVKLKLAMEKLSDDLAVAEKKKVAAQKYASKNKLSRRNIMGTMME KLEGGADKTDKSKVACEKVSPVITAVARNIFGKELSKTDLPSSSTVQTIIDEGHYLAKSYVSEALINSPNWGLHRDGTTR RKQKILDTSVTLSTGDVMSLGFTRVARETSSAIHDVTTQHLHELASLFDENTDVSRDYIKETLQKLAFTMSDRAANEKKA NTLLDEWRDDILSQCPDAEKPEVFAFHCMAHSLLGFHTYACKKLKGTVLERVVRTTSEIFGPAGDHHGVWDQWEAFCSTN GVKSIIGNYRDNRFNAIFQTAVEIMVHRKDFISILDKTKPQNLKIQAVVADLKSDVNSVLLQCYGLMYVKVTRPYWNMIT TADVSYLQLHTHIVSLKSFLEKCATITTVSKALIDTIDKQLVDFLPGGKYSQSLDDQTMTKLHFAPLTNLSCEHHFGDLD SSQRRRPSASMHHHSSIQLLKRNRKKMISWFKSLSDAKKTEMMKKARSGGKKLREVNLQKEREVLAEIHSNLQNESQPSG KRKSTANHGQQQRSRRRTESTPCEDSLKDKLAKKEDILVNTQHKLDSDLYRCQYSLASMYQRAGNLSQGLRYLEAAQSSA VKLKDKYMESEALTQKAIIHLQLGDYSTCKHSLKKAHKLGSTTEEEADKIKKCFKAASKIEEASESLESCPVSPSDTRMS LFETLGDCAAEAGCYKQAIEYYQKM |
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