Gene
| Gene Model ID | pfu_aug2.0_1052.1_08137 |
|---|---|
| Locus | scaffold1052.1 : 168346 ... 177452 : + |
| To GenomeBrowser | scaffold1052.1:168346..177452 |
| Genes list of scaffold | scaffold1052.1 |
| Synonym | pfu_aug1.0_18387.1_61817 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1052.1_08137.t1 | 14 | 1 | zf-H2C2_2 | 9 | 17 | 2.2e-23 | 81.3 | 1.3 | 3900.0 | -1.6 |
| pfu_aug2.0_1052.1_08137.t1 | 14 | 2 | zf-H2C2_2 | 550 | 564 | 2.2e-23 | 81.3 | 0.022 | 66.0 | 4.0 |
| pfu_aug2.0_1052.1_08137.t1 | 12 | 1 | zf-C2H2 | 556 | 578 | 8.1e-13 | 47.8 | 5.0 | 15000.0 | -4.8 |
| pfu_aug2.0_1052.1_08137.t1 | 12 | 1 | zf-C2H2_4 | 556 | 578 | 3.2e-12 | 45.8 | 1.2 | 3500.0 | -1.3 |
| pfu_aug2.0_1052.1_08137.t1 | 10 | 1 | zf-H2C2_5 | 558 | 578 | 4.7e-08 | 32.8 | 0.00069 | 2.0 | 8.7 |
| pfu_aug2.0_1052.1_08137.t1 | 14 | 3 | zf-H2C2_2 | 572 | 592 | 2.2e-23 | 81.3 | 6.7e-05 | 0.2 | 12.0 |
| pfu_aug2.0_1052.1_08137.t1 | 12 | 2 | zf-C2H2 | 583 | 605 | 8.1e-13 | 47.8 | 0.021 | 62.0 | 4.2 |
| pfu_aug2.0_1052.1_08137.t1 | 12 | 2 | zf-C2H2_4 | 583 | 605 | 3.2e-12 | 45.8 | 0.0013 | 3.8 | 8.0 |
| pfu_aug2.0_1052.1_08137.t1 | 10 | 2 | zf-H2C2_5 | 583 | 605 | 4.7e-08 | 32.8 | 0.00047 | 1.4 | 9.2 |
| pfu_aug2.0_1052.1_08137.t1 | 14 | 4 | zf-H2C2_2 | 598 | 620 | 2.2e-23 | 81.3 | 4.3e-08 | 0.00013 | 22.1 |
| pfu_aug2.0_1052.1_08137.t1 | 12 | 3 | zf-C2H2 | 611 | 633 | 8.1e-13 | 47.8 | 0.0018 | 5.2 | 7.6 |
| pfu_aug2.0_1052.1_08137.t1 | 12 | 3 | zf-C2H2_4 | 611 | 633 | 3.2e-12 | 45.8 | 0.0051 | 15.0 | 6.1 |
| pfu_aug2.0_1052.1_08137.t1 | 10 | 3 | zf-H2C2_5 | 611 | 633 | 4.7e-08 | 32.8 | 0.00015 | 0.45 | 10.8 |
| pfu_aug2.0_1052.1_08137.t1 | 14 | 5 | zf-H2C2_2 | 629 | 647 | 2.2e-23 | 81.3 | 0.014 | 41.0 | 4.7 |
| pfu_aug2.0_1052.1_08137.t1 | 12 | 4 | zf-C2H2 | 639 | 663 | 8.1e-13 | 47.8 | 0.14 | 400.0 | 1.6 |
| pfu_aug2.0_1052.1_08137.t1 | 12 | 4 | zf-C2H2_4 | 639 | 664 | 3.2e-12 | 45.8 | 0.039 | 120.0 | 3.4 |
| pfu_aug2.0_1052.1_08137.t1 | 10 | 4 | zf-H2C2_5 | 639 | 663 | 4.7e-08 | 32.8 | 7.3e-06 | 0.022 | 14.9 |
| pfu_aug2.0_1052.1_08137.t1 | 14 | 6 | zf-H2C2_2 | 659 | 680 | 2.2e-23 | 81.3 | 0.0003 | 0.88 | 9.9 |
| pfu_aug2.0_1052.1_08137.t1 | 12 | 5 | zf-C2H2 | 669 | 691 | 8.1e-13 | 47.8 | 1.8e-06 | 0.0054 | 16.9 |
| pfu_aug2.0_1052.1_08137.t1 | 12 | 5 | zf-C2H2_4 | 669 | 692 | 3.2e-12 | 45.8 | 7.0e-05 | 0.21 | 12.0 |
| pfu_aug2.0_1052.1_08137.t1 | 10 | 5 | zf-H2C2_5 | 671 | 691 | 4.7e-08 | 32.8 | 0.86 | 2500.0 | -1.0 |
| pfu_aug2.0_1052.1_08137.t1 | 14 | 7 | zf-H2C2_2 | 684 | 707 | 2.2e-23 | 81.3 | 0.0084 | 25.0 | 5.3 |
| pfu_aug2.0_1052.1_08137.t1 | 12 | 6 | zf-C2H2 | 698 | 719 | 8.1e-13 | 47.8 | 0.00031 | 0.91 | 9.9 |
| pfu_aug2.0_1052.1_08137.t1 | 12 | 6 | zf-C2H2_4 | 698 | 719 | 3.2e-12 | 45.8 | 0.0002 | 0.6 | 10.5 |
| pfu_aug2.0_1052.1_08137.t1 | 10 | 6 | zf-H2C2_5 | 698 | 719 | 4.7e-08 | 32.8 | 0.0058 | 17.0 | 5.8 |
| pfu_aug2.0_1052.1_08137.t1 | 14 | 8 | zf-H2C2_2 | 712 | 735 | 2.2e-23 | 81.3 | 0.005 | 15.0 | 6.0 |
| pfu_aug2.0_1052.1_08137.t1 | 12 | 7 | zf-C2H2 | 725 | 749 | 8.1e-13 | 47.8 | 1.1e-05 | 0.032 | 14.5 |
| pfu_aug2.0_1052.1_08137.t1 | 12 | 7 | zf-C2H2_4 | 725 | 749 | 3.2e-12 | 45.8 | 0.0023 | 6.9 | 7.2 |
| pfu_aug2.0_1052.1_08137.t1 | 10 | 7 | zf-H2C2_5 | 726 | 749 | 4.7e-08 | 32.8 | 0.0013 | 3.9 | 7.8 |
| pfu_aug2.0_1052.1_08137.t1 | 14 | 9 | zf-H2C2_2 | 741 | 766 | 2.2e-23 | 81.3 | 2.2e-10 | 6.5e-07 | 29.3 |
| pfu_aug2.0_1052.1_08137.t1 | 12 | 8 | zf-C2H2 | 757 | 777 | 8.1e-13 | 47.8 | 7.9e-05 | 0.23 | 11.8 |
| pfu_aug2.0_1052.1_08137.t1 | 12 | 8 | zf-C2H2_4 | 757 | 777 | 3.2e-12 | 45.8 | 2.4e-06 | 0.0071 | 16.6 |
| pfu_aug2.0_1052.1_08137.t1 | 14 | 10 | zf-H2C2_2 | 771 | 792 | 2.2e-23 | 81.3 | 0.00013 | 0.38 | 11.1 |
| pfu_aug2.0_1052.1_08137.t1 | 12 | 9 | zf-C2H2 | 783 | 805 | 8.1e-13 | 47.8 | 1.1e-05 | 0.034 | 14.4 |
| pfu_aug2.0_1052.1_08137.t1 | 12 | 9 | zf-C2H2_4 | 785 | 805 | 3.2e-12 | 45.8 | 0.00021 | 0.64 | 10.4 |
| pfu_aug2.0_1052.1_08137.t1 | 10 | 8 | zf-H2C2_5 | 785 | 806 | 4.7e-08 | 32.8 | 0.11 | 320.0 | 1.8 |
| pfu_aug2.0_1052.1_08137.t1 | 14 | 11 | zf-H2C2_2 | 798 | 822 | 2.2e-23 | 81.3 | 1.4e-08 | 4.1e-05 | 23.6 |
| pfu_aug2.0_1052.1_08137.t1 | 12 | 10 | zf-C2H2 | 811 | 833 | 8.1e-13 | 47.8 | 1.3e-05 | 0.039 | 14.3 |
| pfu_aug2.0_1052.1_08137.t1 | 12 | 10 | zf-C2H2_4 | 811 | 834 | 3.2e-12 | 45.8 | 1.2e-05 | 0.035 | 14.4 |
| pfu_aug2.0_1052.1_08137.t1 | 10 | 9 | zf-H2C2_5 | 811 | 833 | 4.7e-08 | 32.8 | 0.0096 | 29.0 | 5.1 |
| pfu_aug2.0_1052.1_08137.t1 | 14 | 12 | zf-H2C2_2 | 828 | 850 | 2.2e-23 | 81.3 | 1.2e-06 | 0.0034 | 17.5 |
| pfu_aug2.0_1052.1_08137.t1 | 12 | 11 | zf-C2H2 | 840 | 863 | 8.1e-13 | 47.8 | 2.4e-05 | 0.07 | 13.4 |
| pfu_aug2.0_1052.1_08137.t1 | 12 | 11 | zf-C2H2_4 | 840 | 863 | 3.2e-12 | 45.8 | 4.1e-05 | 0.12 | 12.7 |
| pfu_aug2.0_1052.1_08137.t1 | 10 | 10 | zf-H2C2_5 | 840 | 864 | 4.7e-08 | 32.8 | 2.0e-05 | 0.059 | 13.6 |
| pfu_aug2.0_1052.1_08137.t1 | 14 | 13 | zf-H2C2_2 | 854 | 878 | 2.2e-23 | 81.3 | 0.0083 | 25.0 | 5.4 |
| pfu_aug2.0_1052.1_08137.t1 | 12 | 12 | zf-C2H2 | 869 | 892 | 8.1e-13 | 47.8 | 0.0016 | 4.8 | 7.7 |
| pfu_aug2.0_1052.1_08137.t1 | 12 | 12 | zf-C2H2_4 | 870 | 892 | 3.2e-12 | 45.8 | 0.016 | 47.0 | 4.6 |
| pfu_aug2.0_1052.1_08137.t1 | 14 | 14 | zf-H2C2_2 | 888 | 894 | 2.2e-23 | 81.3 | 5.0 | 15000.0 | -5.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1052.1_08137.t1 | gi|524884733|ref|XP_005098985.1| | PREDICTED: uncharacterized protein LOC101853001 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1052.1_08137.t1 | gi|676446290|ref|XP_009051031.1| | hypothetical protein LOTGIDRAFT_114371, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1052.1_08137.t1 | gi|658847934|ref|XP_008406471.1| | PREDICTED: gastrula zinc finger protein XlCGF57.1-like [Poecilia reticulata] | 0.0 |
| pfu_aug2.0_1052.1_08137.t1 | gi|658860796|ref|XP_008413158.1| | PREDICTED: zinc finger protein OZF-like [Poecilia reticulata] | 0.0 |
| pfu_aug2.0_1052.1_08137.t1 | gi|617469795|ref|XP_007574990.1| | PREDICTED: gastrula zinc finger protein XlCGF57.1-like [Poecilia formosa] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1052.1_08137.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1052.1_08137.t1 atggaaggtgtctgcaatgtagatgttcatacagggtctaatcctcatgaaaaagacgggaaaaatgagaaatctgttgt taaacttagtttcactttaagtggcgataatgataaggttaaagttgacactaagattgaagcaagtagcacagccaaac aatgtattaacactaaaattgacattagttatgagaatggaaaaagttatgagattggacagaagagagctatacaacag tccccaagaaaatttgctcagactcagtgttgtgaaaattctgcaacaattgacgagtgcccaactgagcattccgcaaa aatttatgacgaaaaagatgagacacccaatgattcacgtgctgacttgtgcaaaaaggaaacagataactctgaaaatc actctttggaaatggagaaagtttcttacaaacgcaaatcgttttgtgaaagtcagattgaaggagtagaagattacgat ggaaatgtcaaagataattcaaatgtagatgatgatatgacagattgtgagggaaacaattgtgaatttagcggaacaaa agtccagggttcaaatcgctcattgcagtattctaaaaatattgaaaatattggtgaaaatgacattatttcagatcaaa gtggaaatgagatcttgacagagggttcctgtgtcaaaacaagcgtggtggaagaaacaaacattttactgcaaaatatc gtcaatcaaacccatgttgtggaggaagtgaacttgagggaggaaatagccgtaggtgatattgctgaggaaatagatgt agctgatatcaaacgcagaaatgaaaataataattctgaaactttaagaggtgaattggaaaggaagataccagaaaaag tgaagcctgttcctaagaaagccggtcgccctaagaaggctaaatatgttgcaaagagtgttggcctttcaaagaaattg attgtagaaaagaaaaccagagctttagatatttctaaaagaggacgtcccaaaaaatgtaagacttcagagaaaatcac tgtagaggaaccgattgtgaagaaacgaagaacaaacaacagcatgtctattggactagataacaacgaagaagcaagca ttgagtttctctccttggggaacaccaaaggcaggaaaaaacttacgaattacagtgaggaaagggaaggagaaaataac aacgaagaagcaagcattgagtttctctccttggggaacaccaaaggcaggaaaaaacttacaaattacagtgaggaaat tgaaggagaaagtgaagaaaattccgaagaaaactatgaaatagaagaacgcaagtcaaataaaactaaaacttctcaga aaaatgactctgtagctgcaaaaaataccagggtgaaactcaagaaactagaagtatcattaacaaaagttgacataaca aaatataacagtggagcaactaaagatcttgattccacaggagaaacacacaatacaaagctaggcaaggaaagtaagat gattgaaaaaggaaagagccgatcaaaaaagaaaagtgtaaaggcagtcaaagtaagatccaaggattcagcaccagttc ttcccaagtacaaacttgattatacctttgagataaaagttgttggtggccagaaaattaaaactttctactgtaagcat tgtaagtacaaatcacgtttcaaatgtggaatggtgagacacttttctatacacagtgttcctctacatgaatgtcagta ttgtgactacaagacgcgaagctttgaagttttccaagagcacgaggcaaagcacacaaaggagaagccgtttaagtgtg agaagtgtgactataggtgtaggtacagagtggatctgcatcatcatcaggcaaaacacatggaggagaaaaagttccgt tgtccgcacaagggctgcaacttcattacaaaatggaagaagaacatttcacatcatgttaagagccataacacaacacg accatttgtttgtcacatatgctctatgacttttaaacgaggccagacgttaaaaaatcacctgtttcgtcacaatgatg ataaaccaaagaaatgtgatgagtgtgggttccgctgtaagagtaattatgagctacggatgcacaaacttaaacacagc gatgtgcgaccgtttccctgcacatttcctggatgtcaacagagatgtaaggtgaagtcagatctagtcaagcatatgag aattcacaccaaagagaggaacgtactgtgtcctctatgtggaaaaggattcaagtctctatcagattgtaacaagcatc agaagaggcactctgatataagaccgtatggatgtgacatctgtggaaagttcttcaggttcattcaaggactcaaacaa catctgaggaatcatcagggcatcaagccgttccagtgtgacgtatgtggtcatctcttctcaaacaagtcaaataagga caatcacatgaaaactcacaattatgatgagcgtccgtatagatgtcctatttgcccgtatggagccaagagtaaagacc acctgctagcacatattggtacgatgcacggccactcgtacgctttcttttgcgagctttgcaagaagcctttccagcgt tatttccagttggtcacgcatcattcgagaatgcacaccaaagcagaaatgaacaagttcatgagctccataggtgtcaa tatggaggaggcacaaaaggaaatcaaagttgaaatggttgaggaaggtttgatgacaagggaacagattggacacatgc aagtaactctacagcagcaacaaaacagcatggatgctgaagagggggatgaggaacacatggctgattggggcagtgaa catggaggaacagaacagtctacggagaatgtaagggaggagaacacagagagcacactctctgacaagactgctaactc tataccagttgaaccacaggatgctgataacgaagtagatgagaccgccacagcaagtgatcagttgatggaagatcaaa gtgagaaatcttcagacgggaaaacttcagaggaaggatctataccattaggacatgttattaaacaagagccaagagaa catgtaaatgtgtctgctactctcgctatctatgatggattcaggcttccattgtttacaagaggatttgaatttaatcc agacaagagtggaaagaaacctcgctgttggtttatggagatggacaacatgcatgaagacatcaagtggcaccaggaac ggatagatggtagaaaaggagcaaggaaaaggaagaaaaggtttgaacatttagaaagtgatgatgatttggaagagatc ttggcagagatatgtgatgacatgccatcacagcaggttacagagaaacccattgaagaaaatgaacatttagaggtatc tgctgtgaaaaagccaaaaggaagacccccaaaaagtaaagacaaagaagatcttgcagggaaggctggaagtcccaaaa agagaggaagaccgccaaggccaaaggtggctgaagagtctgagaaggcaatagagatacgtcctgatggcaacattgat ggagatggtgttttggacattccgaatgaggagatggttggtgaaaaggcagggagttcaaaagaacaggcaaagaagaa aaattgcaaaaccaaactcttgactcaaacaaatgttgtcagtgcaaagaagaagaaagtggttaaaacagaaaccaata ttaaaagaaagggtaatttaaaggaagaaactcatagcgtgaaaaacaaaaagcaatcaaagtctaagacttatacttca ggaaaacaatcttcgacaaataagggaactggtgtaaaaaagccaaaagttactaatcaaaagaaaggcaaagtttccac gcagaaaaagaagcagactgtgtcaaagacaactgaagatgcaaagaaggactccgccaaaatcatcagaaaagtacctc ctataaggcttaaattacaaaagaaaaacaaaaaacgcatatggaaatgtgaaacgagccctaaaaaattgaccaaagga tcagcgaagaaaactgttaagattgctgcaaaacctactgccaagaaaggcaagcagaaaagttctagtaaaaagagcac aagcagaaagaaaagtcagacaaatggatttgttatcgattgggaaactgaggaacaggtcggaggaccttctgattcta acgtgtatgtggagaatgactttaacggcaccggaatcaaagtggagatatctgatgaggtacaggataattatcttgga ccagagtatcgagcgaacgattcatgtgcagaggaggaatccaaagacaatattccgaaaccaaccgcttcattttattg cgatgatgtcattttgatgaaaaattcgcgggaaagtctcaaagtattacaaaatccgccaagtctctcaatgctaggga ttgaaaattcctccagcaggttgggcactgtcacacatgttgaagaagatgaaaactctgagacgaaggaacttgaactt aacgatattgttatgggatcgtcttctaaagtgtgtgtgtaccgaaatccggaaatctcagatctgggtgactttatgaa gatacatagtgaagatctgattcaggacatttgtgtggcacaggaaattaattccgatatcaaggcggaaccgatttga |
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Protein
| Protein ID | pfu_aug2.0_1052.1_08137.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1052.1_08137.t1 MEGVCNVDVHTGSNPHEKDGKNEKSVVKLSFTLSGDNDKVKVDTKIEASSTAKQCINTKIDISYENGKSYEIGQKRAIQQ SPRKFAQTQCCENSATIDECPTEHSAKIYDEKDETPNDSRADLCKKETDNSENHSLEMEKVSYKRKSFCESQIEGVEDYD GNVKDNSNVDDDMTDCEGNNCEFSGTKVQGSNRSLQYSKNIENIGENDIISDQSGNEILTEGSCVKTSVVEETNILLQNI VNQTHVVEEVNLREEIAVGDIAEEIDVADIKRRNENNNSETLRGELERKIPEKVKPVPKKAGRPKKAKYVAKSVGLSKKL IVEKKTRALDISKRGRPKKCKTSEKITVEEPIVKKRRTNNSMSIGLDNNEEASIEFLSLGNTKGRKKLTNYSEEREGENN NEEASIEFLSLGNTKGRKKLTNYSEEIEGESEENSEENYEIEERKSNKTKTSQKNDSVAAKNTRVKLKKLEVSLTKVDIT KYNSGATKDLDSTGETHNTKLGKESKMIEKGKSRSKKKSVKAVKVRSKDSAPVLPKYKLDYTFEIKVVGGQKIKTFYCKH CKYKSRFKCGMVRHFSIHSVPLHECQYCDYKTRSFEVFQEHEAKHTKEKPFKCEKCDYRCRYRVDLHHHQAKHMEEKKFR CPHKGCNFITKWKKNISHHVKSHNTTRPFVCHICSMTFKRGQTLKNHLFRHNDDKPKKCDECGFRCKSNYELRMHKLKHS DVRPFPCTFPGCQQRCKVKSDLVKHMRIHTKERNVLCPLCGKGFKSLSDCNKHQKRHSDIRPYGCDICGKFFRFIQGLKQ HLRNHQGIKPFQCDVCGHLFSNKSNKDNHMKTHNYDERPYRCPICPYGAKSKDHLLAHIGTMHGHSYAFFCELCKKPFQR YFQLVTHHSRMHTKAEMNKFMSSIGVNMEEAQKEIKVEMVEEGLMTREQIGHMQVTLQQQQNSMDAEEGDEEHMADWGSE HGGTEQSTENVREENTESTLSDKTANSIPVEPQDADNEVDETATASDQLMEDQSEKSSDGKTSEEGSIPLGHVIKQEPRE HVNVSATLAIYDGFRLPLFTRGFEFNPDKSGKKPRCWFMEMDNMHEDIKWHQERIDGRKGARKRKKRFEHLESDDDLEEI LAEICDDMPSQQVTEKPIEENEHLEVSAVKKPKGRPPKSKDKEDLAGKAGSPKKRGRPPRPKVAEESEKAIEIRPDGNID GDGVLDIPNEEMVGEKAGSSKEQAKKKNCKTKLLTQTNVVSAKKKKVVKTETNIKRKGNLKEETHSVKNKKQSKSKTYTS GKQSSTNKGTGVKKPKVTNQKKGKVSTQKKKQTVSKTTEDAKKDSAKIIRKVPPIRLKLQKKNKKRIWKCETSPKKLTKG SAKKTVKIAAKPTAKKGKQKSSSKKSTSRKKSQTNGFVIDWETEEQVGGPSDSNVYVENDFNGTGIKVEISDEVQDNYLG PEYRANDSCAEEESKDNIPKPTASFYCDDVILMKNSRESLKVLQNPPSLSMLGIENSSSRLGTVTHVEEDENSETKELEL NDIVMGSSSKVCVYRNPEISDLGDFMKIHSEDLIQDICVAQEINSDIKAEPI |
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