Gene
| Gene Model ID | pfu_aug2.0_1052.1_08133 |
|---|---|
| Locus | scaffold1052.1 : 90746 ... 99624 : + |
| To GenomeBrowser | scaffold1052.1:90746..99624 |
| Genes list of scaffold | scaffold1052.1 |
| Synonym | pfu_aug1.0_3858.1_59339 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1052.1_08133.t1 | 3 | 1 | SPT16 | 61 | 116 | 0.0 | 180.8 | 0.052 | 260.0 | 1.3 |
| pfu_aug2.0_1052.1_08133.t1 | 3 | 2 | SPT16 | 123 | 176 | 0.0 | 180.8 | 0.33 | 1600.0 | -1.2 |
| pfu_aug2.0_1052.1_08133.t1 | 3 | 3 | SPT16 | 185 | 343 | 0.0 | 180.8 | 0.0 | 0.0 | 180.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1052.1_08133.t1 | gi|572318094|ref|XP_006624625.1| | PREDICTED: FACT complex subunit spt16-like [Apis dorsata] | 0.0 |
| pfu_aug2.0_1052.1_08133.t1 | gi|328790396|ref|XP_624006.3| | PREDICTED: FACT complex subunit spt16 [Apis mellifera] | 0.0 |
| pfu_aug2.0_1052.1_08133.t1 | gi|380019514|ref|XP_003693649.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1052.1_08133.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1052.1_08133.t1 atgagttcaataagatcaatacagccaactaaaccaatagagtttctgccgtgtgcccaaacagaaagaagaagaggact ggacttagaatggtctttaaattttcagaaagcgtcaggtggtgatactctgggacaggttgatgccctggcggcggctg taggagttgatgaggaagtagtgtattcaaaatcaacggcattacagggttcagcagcttcattacttacaactctaaaa aagcgggtaaaacatgcatgtattttcctgaaagacgaggaggaagaagaagaagaaaaagaggaggagccagtgttact ggggcgtggtcagagaaatgctgtcctggatagtagaaccaggactgagatgacggcggaggagaaacgacaacaacatc agaaagagttagcccagaaaataaacgaggatgctcgggaaagactgaaagggctcaagtctggcactgaggataaaaaa gttcgaaagtccaatgtttcttacaaatctctgtcacagttaccaaacgaatcggaagtaaaaaatttacagctttatgt cgacagaaaatatgaaaccattatcttgccaatatttggagtgcccacaccctttcacattgcaactataaagaacataa gtcagtcagttgagggggactacacatacctacgtatcaactttttccaccccggctcggcactcggcagaaatgaagga tcattattcccacaaccagatgctactttcctaaaagaaataacttacagaagttcaaacaccaaagaaccaggggagat ttcagctccctcctcaaatcttaacacggctttccgactcatcaaagaagtacagaaaaagttcagaactcgagaggctg aggagagagagaaagagggtattgtgaaacaagacagcttggtaataaatcccaacaggggaaatcctaaactaaaggac ttgtacatcagacctaatattgtgtccaaaaggatatcgggaacattagaggcccatgtaaatggtatgtga |
|
Protein
| Protein ID | pfu_aug2.0_1052.1_08133.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1052.1_08133.t1 MSSIRSIQPTKPIEFLPCAQTERRRGLDLEWSLNFQKASGGDTLGQVDALAAAVGVDEEVVYSKSTALQGSAASLLTTLK KRVKHACIFLKDEEEEEEEKEEEPVLLGRGQRNAVLDSRTRTEMTAEEKRQQHQKELAQKINEDARERLKGLKSGTEDKK VRKSNVSYKSLSQLPNESEVKNLQLYVDRKYETIILPIFGVPTPFHIATIKNISQSVEGDYTYLRINFFHPGSALGRNEG SLFPQPDATFLKEITYRSSNTKEPGEISAPSSNLNTAFRLIKEVQKKFRTREAEEREKEGIVKQDSLVINPNRGNPKLKD LYIRPNIVSKRISGTLEAHVNGM |
|