Gene
| Gene Model ID | pfu_aug2.0_1052.1_08123 |
|---|---|
| Locus | scaffold1052.1 : 8666 ... 13548 : + |
| To GenomeBrowser | scaffold1052.1:8666..13548 |
| Genes list of scaffold | scaffold1052.1 |
| Synonym | pfu_aug1.0_37619.1_70241 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1052.1_08123.t1 | 1 | 1 | YqaJ | 381 | 540 | 9.0e-16 | 58.2 | 3.3e-19 | 1.6e-15 | 57.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1052.1_08123.t1 | gi|241632756|ref|XP_002410371.1| | hypothetical protein IscW_ISCW024557 [Ixodes scapularis] | 8.0e-28 |
| pfu_aug2.0_1052.1_08123.t1 | gi|637329816|ref|XP_008114444.1| | PREDICTED: uncharacterized protein LOC103279721 [Anolis carolinensis] | 1.0e-22 |
| pfu_aug2.0_1052.1_08123.t1 | gi|556980117|ref|XP_005996811.1| | PREDICTED: uncharacterized protein LOC102362495 [Latimeria chalumnae] | 1.0e-22 |
| pfu_aug2.0_1052.1_08123.t1 | gi|742082355|ref|XP_010868491.1| | PREDICTED: uncharacterized protein LOC105010675 isoform X2 [Esox lucius] | 4.0e-22 |
Transcript
| Transcript ID | pfu_aug2.0_1052.1_08123.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1052.1_08123.t1 atgtcaacagcatttcaacaagatactgtgttagctgattttatgatcgaggaaaagaagttagagataattcagtatga ctctcaaattctcatagaaataagcaatgaggaacaccagtcaaaaaccattagtatgagagcggaaatgtggaaatact tctgcgatcaaattgagtccgttaaacttgctgtcactaaattcttattgagaggaagggatgatgattttatcaatagc gatcttaggaaaatatgtcgtgacgtcactaattcgacatccgggttaccgccaagggtaaaacaactaagcaatatggc ggacgaagaacgaagcgacgcggaaagtacgatatattttgagaaattagacgagaaaaacatacctggggcatcattat caaaactaccagaacaacttacagttcaggaattacgacgatggctatcctgtaggaaaggagccagtttaaagggtcga aaatcggatcttgtcgaaagagtgaagctttatcagcaacatggatgggataggcaatatctgataaacccagacaaaca cacaagcaaagtgtacaacgctggtgcaattaacagcccatttgtacacagtttattggataatcccccacctgctgggt acaccaactcgctgacaggaatacctattatcgatgacagcgatatatttcagtatttcctaatcaaatgcgacggtgca gattccacggcagtcaaacacagagacaagggatggaattttcacaaatctggaaaagttcgctcatgtcctgatggtga caattgcgtcacaaaagagaaaattgaaaaatttgcaaccgaaatgtcatcacttggagttgcaacacatttcgttgaaa ttttaaatgctaacaagtgcatgccagttcatacaaatagcaatgtgggagaaaacgacaacaatgaagtgttgcagata gcagaccctcttcctgcaccccagcctgtgcttgcatctataaatattgatacaacaattgattccaatctactttcaga ggatgaggttgatttttacgaaagtagggtaaaaattacaacaattgacgaacaaaggcgcatcgcagagtcaaccattg gacaagccgcaaacagtaactggttcaaggagaggaaaattcgactaacagcgtcacattttaaagaagtagcatgtaga aaacgctttccttgcgataaattggtggaccgcctcacatccactggaacacaacatttcaagagtcagaacacggaatg gggaaaacaagcagaaccaattgcgctcgctcagtatcgcactatcaaggaacaggagggctatattgtgtcgggaggag atatcggattagtagtaaacccaaattttccatatcttgcggcatctccagactggtttgttgaacttaaaaaaccgggg cataacagccaatgtggacttgtcgaggttaaatctctagccaaacatgctaatctgaccccggcggaagctgcagaatt cagttcatttttttcttttcaaaatggtcatgttgaaattgattgtaaccatgcctattattatcaaattcaaggtcaaa tggcagtttgtggtattgaatggtgtgaccttgtagtatggactccaaaaggaattgattctactgccattcaaagaata cacagagatccaaaattctgggctgaaacctttccttcactgaaaacattttattttcagtacattcttccaaaattaac aaatcaaaatattgaagctcagttagaacaaagtaaatgtggctaa |
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Protein
| Protein ID | pfu_aug2.0_1052.1_08123.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1052.1_08123.t1 MSTAFQQDTVLADFMIEEKKLEIIQYDSQILIEISNEEHQSKTISMRAEMWKYFCDQIESVKLAVTKFLLRGRDDDFINS DLRKICRDVTNSTSGLPPRVKQLSNMADEERSDAESTIYFEKLDEKNIPGASLSKLPEQLTVQELRRWLSCRKGASLKGR KSDLVERVKLYQQHGWDRQYLINPDKHTSKVYNAGAINSPFVHSLLDNPPPAGYTNSLTGIPIIDDSDIFQYFLIKCDGA DSTAVKHRDKGWNFHKSGKVRSCPDGDNCVTKEKIEKFATEMSSLGVATHFVEILNANKCMPVHTNSNVGENDNNEVLQI ADPLPAPQPVLASINIDTTIDSNLLSEDEVDFYESRVKITTIDEQRRIAESTIGQAANSNWFKERKIRLTASHFKEVACR KRFPCDKLVDRLTSTGTQHFKSQNTEWGKQAEPIALAQYRTIKEQEGYIVSGGDIGLVVNPNFPYLAASPDWFVELKKPG HNSQCGLVEVKSLAKHANLTPAEAAEFSSFFSFQNGHVEIDCNHAYYYQIQGQMAVCGIEWCDLVVWTPKGIDSTAIQRI HRDPKFWAETFPSLKTFYFQYILPKLTNQNIEAQLEQSKCG |
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