Gene
| Gene Model ID | pfu_aug2.0_1036.1_21358 |
|---|---|
| Locus | scaffold1036.1 : 72642 ... 82155 : - |
| To GenomeBrowser | scaffold1036.1:72642..82155 |
| Genes list of scaffold | scaffold1036.1 |
| Synonym | pfu_aug1.0_10026.1_38986 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1036.1_21358.t1 | 3 | 1 | Ank_4 | 9 | 35 | 6.6e-18 | 64.7 | 0.00012 | 0.3 | 11.6 |
| pfu_aug2.0_1036.1_21358.t1 | 2 | 1 | Ank_2 | 10 | 87 | 5.7e-26 | 90.6 | 9.8e-19 | 2.4e-15 | 56.6 |
| pfu_aug2.0_1036.1_21358.t1 | 4 | 1 | Ank_5 | 17 | 52 | 1.5e-21 | 75.9 | 4.2e-06 | 0.01 | 16.0 |
| pfu_aug2.0_1036.1_21358.t1 | 4 | 1 | Ank_3 | 24 | 52 | 2.6e-13 | 48.7 | 0.00056 | 1.4 | 9.3 |
| pfu_aug2.0_1036.1_21358.t1 | 4 | 1 | Ank | 25 | 54 | 1.7e-23 | 81.1 | 3.9e-06 | 0.0096 | 15.6 |
| pfu_aug2.0_1036.1_21358.t1 | 3 | 2 | Ank_4 | 39 | 77 | 6.6e-18 | 64.7 | 1.4e-10 | 3.4e-07 | 30.5 |
| pfu_aug2.0_1036.1_21358.t1 | 4 | 2 | Ank_5 | 43 | 94 | 1.5e-21 | 75.9 | 1.1e-14 | 2.6e-11 | 43.3 |
| pfu_aug2.0_1036.1_21358.t1 | 4 | 2 | Ank_3 | 56 | 84 | 2.6e-13 | 48.7 | 7.4e-07 | 0.0018 | 18.3 |
| pfu_aug2.0_1036.1_21358.t1 | 4 | 2 | Ank | 58 | 87 | 1.7e-23 | 81.1 | 2.1e-12 | 5.2e-09 | 35.4 |
| pfu_aug2.0_1036.1_21358.t1 | 2 | 2 | Ank_2 | 87 | 153 | 5.7e-26 | 90.6 | 1.1e-11 | 2.7e-08 | 34.0 |
| pfu_aug2.0_1036.1_21358.t1 | 4 | 3 | Ank | 89 | 120 | 1.7e-23 | 81.1 | 1.1e-09 | 2.8e-06 | 26.8 |
| pfu_aug2.0_1036.1_21358.t1 | 4 | 3 | Ank_3 | 89 | 114 | 2.6e-13 | 48.7 | 1.1e-06 | 0.0028 | 17.7 |
| pfu_aug2.0_1036.1_21358.t1 | 4 | 3 | Ank_5 | 91 | 130 | 1.5e-21 | 75.9 | 1.4e-11 | 3.5e-08 | 33.4 |
| pfu_aug2.0_1036.1_21358.t1 | 3 | 3 | Ank_4 | 91 | 131 | 6.6e-18 | 64.7 | 1.9e-08 | 4.7e-05 | 23.7 |
| pfu_aug2.0_1036.1_21358.t1 | 4 | 4 | Ank | 123 | 153 | 1.7e-23 | 81.1 | 0.075 | 180.0 | 2.1 |
| pfu_aug2.0_1036.1_21358.t1 | 4 | 4 | Ank_3 | 123 | 132 | 2.6e-13 | 48.7 | 0.25 | 610.0 | 1.2 |
| pfu_aug2.0_1036.1_21358.t1 | 4 | 4 | Ank_5 | 139 | 150 | 1.5e-21 | 75.9 | 2.5 | 6200.0 | -2.4 |
| pfu_aug2.0_1036.1_21358.t1 | 1 | 1 | SOCS_box | 187 | 226 | 4.2e-13 | 48.9 | 2.9e-16 | 7.1e-13 | 48.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1036.1_21358.t1 | gi|524894271|ref|XP_005103637.1| | PREDICTED: ankyrin repeat and SOCS box protein 8-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1036.1_21358.t1 | gi|524894269|ref|XP_005103636.1| | PREDICTED: ankyrin repeat and SOCS box protein 8-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1036.1_21358.t1 | gi|29839754|sp|Q91ZT9.1|ASB8_MOUSE | Ankyrin repeat and SOCS box protein 8 | 0.0 |
| pfu_aug2.0_1036.1_21358.t1 | gi|12854574|dbj|BAB30077.1| | unnamed protein product [Mus musculus] | 0.0 |
| pfu_aug2.0_1036.1_21358.t1 | gi|282397100|ref|NP_084397.3| | ankyrin repeat and SOCS box protein 8 [Mus musculus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1036.1_21358.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1036.1_21358.t1 atgcgatatgactttcatttgtcaggtcatctagactctttagccaacctggtgaatgatagagatggttatggtagagc agctattcactatgcagcagagagggacccactatgtttggagctactactggctcatggagcagacattaatgccggtg atggtaacagggacaccgccttacactgggcatcgtttaaaaataacataccgtgtgtgaaactactgttacaacatggg gccactgtagatgttaaagacttcaataatgatactccattaggatgggcagctaggaaaggaaacttgggagtgatcaa actactgctgaaatacaacgcctgtgtagatgtatgtaacatgagaggagatacacctttatctagagctattgccgttc aagtctccggactcaatactgctgctgacgatgcttgcctggaactgttactgaaagctgcaggtcaaatcaacttcagt gagaataacggacgagtgagaaacgaaatttcccaagataataaactacgtgagatgatacttcctttatgtaccaatgt taggaatttacaggatttgtgtagatacaagataagaatttctcttggttatagataccttcccaatgtcattcctaagc ttcctattcctgtaaggctgaaagattatatttcattggaaagctga |
|
Protein
| Protein ID | pfu_aug2.0_1036.1_21358.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1036.1_21358.t1 MRYDFHLSGHLDSLANLVNDRDGYGRAAIHYAAERDPLCLELLLAHGADINAGDGNRDTALHWASFKNNIPCVKLLLQHG ATVDVKDFNNDTPLGWAARKGNLGVIKLLLKYNACVDVCNMRGDTPLSRAIAVQVSGLNTAADDACLELLLKAAGQINFS ENNGRVRNEISQDNKLREMILPLCTNVRNLQDLCRYKIRISLGYRYLPNVIPKLPIPVRLKDYISLES |
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