Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1027.1_24623
Locus scaffold1027.1 : 136056 ... 149171 : +
To GenomeBrowser scaffold1027.1:136056..149171
Genes list of scaffold scaffold1027.1
Synonym pfu_aug1.0_142.1_43503

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1027.1_24623.t1 gi|676494176|ref|XP_009066476.1| hypothetical protein LOTGIDRAFT_155690 [Lottia gigantea] 0.0
pfu_aug2.0_1027.1_24623.t1 gi|524888464|ref|XP_005100803.1| PREDICTED: uncharacterized protein LOC101860662 [Aplysia californica] 0.0
pfu_aug2.0_1027.1_24623.t1 gi|242003000|ref|XP_002422573.1| tiptop, putative [Pediculus humanus corporis] 9.0e-29
pfu_aug2.0_1027.1_24623.t1 gi|749735977|ref|XP_011154173.1| PREDICTED: LOW QUALITY PROTEIN: protein tiptop [Harpegnathos saltator] 4.0e-27
pfu_aug2.0_1027.1_24623.t1 gi|340723889|ref|XP_003400319.1| 8.0e-27

Transcript
Transcript IDpfu_aug2.0_1027.1_24623.t1
Definition-
>pfu_aug2.0_1027.1_24623.t1
atgcactcatcgtcggtgtcgaagccggtgttgcatggtggtacgaagagcgataactctacttcatctgcttctgcggg
agacagcaactcagagagtggagaaagcgaagaggatgtgaataacgataaagtgggaaaattggaggagtctacgaatt
cggacgaaatacccgcgaatgatcaaacgaatcgttgcgaaaatgacgaaaattatgtgcagtctgcgaaaaacgaagag
atagattcgtttgaagagagaagtaaggaagacgtgaattgttcgttgactgaggagagtatagagggtacgaatacaac
agaaacaaaaatgactctcaaaacagaggataaaagcccgtcatcaagtgacgatgacgtcatcaagactgatacgacaa
atgaactcactaatgagaaatcaaagaggtcagagactccccctttgaagagactcatgcgacaagatccgcttccttta
ttcatgcgcgataaaggcccatcacctccgaagaaaatcttccgcgaggaaatatattccaaacatcataatgtcccgtt
tttatcttcgccacattcgtctttacttaaacatattcctactcatccaaaacaggcaatgctaaaggcgaagcactact
ctaacaagctactcacaccttttatacccttcaatattccgaaagtcgtcatcgacgaccaacctctagatttatcgaag
aaaagttctagtaaatccattccagaatttccgaagaaagacttgcctccagatacgaaaaaatcgcctggtaaatatac
caacgggtttctgtctaatgtaggtcattcgcattctagtctacaaagtctacaaaaacgttttggaggggacataccta
ccaaaactcatcgtcatccaatgagcggaatgcttcttaacgttcctccaacatacatgtcccataatgctatgcattta
ccacatccggttttgaattccactcaaacagatggttgtaggaagatctcaaaatcacaaagtagcccgagtcaatctac
aagtaaacttgaaaagaaacctgaaaagggcgaaagttccgaatcgaaacgaaaaagtcctcataacacgaccgatctga
attccaatgtaacttcaaaatctgaagacagtaaatcgacctcctctaaagaggaaaatagtaaatacacaatccataag
tgttcttgccagaaaacttacaatactttatatggacttagtctgcacctacaagaaacgggacatcttcccgccgggac
taaacaagccagcctcatggagtatcccaaactagttcgcggacaggacatgtggcttaaccaagaatcggaacaaacca
aacgtatattgcgttgtattcagtgcggcgaatcgttcaaatctttgccgatgctcaccgtgcatatgatgcaaacgcag
cactataccaaaattgtgagttctgagcacggccgacgcgcgcacaaatgttccgcatactgtgatagagacttggatcg
ggagtgcatctttaagtgtaaagtttgtaacggcactttcagtgacatggagggactggccaaccatatgattctatctg
ggcatcataagaaaaatttacttaagcacaattatatggctatcaatcttaaagggaagagaaagcgcttctctagtggt
gaagacagtatagatactacaggatcttcgacaattgcgtctatttttgaatacaagcggaagtgcctgcgcgattcggc
gtccccgataagaaagagaaagcgcttctctagtggtgaagacagtatagatactacaggatcttcgacaattgcgtcta
tttttgaatacaagcggaagtgcctgcgcgattcggcgtccccgataagtaacggacatagccgaatgtcagacagtccg
aacagcgatttgcaggaggatagtaggataacgtgcgaaaattgtggagagagaatcgaaactggacatttcgtcgacca
cgtcagggaatgtttacttcaatcaaggtatgaatctccttttacaagactgaaaataaagaaagaaatcgacgacgtca
cggacgacgcaaaaagtaacgatgacgtcagtgataaattcctgacgtcggacgaggacgaacgaacggaaagaaaaccg
cttaaactgcagctgaaattggaaaagattgagaaggacgagaaagaccgcgatattaaatccgaaaacggcgatgaatc
tgaaaaatctctttcaattgatgtcacaagtgaacgcgggaaagatgaaacgaaagtagattcgataaaaacggagagta
aattagacgatgatgatgacgatgaaagtcaaaatttggagacacacgatatcgacggacggaaatttgaatcgaaagtc
atcgcaaaagccgaagtttcggcacgaaagcatttggatattattgatccggatactgcagaagaacagaatgttgacgg
aaattccgctttacaagccatggagtcgtttatacagagaagtttcagttctaaatttaactacaggcgaaacagtggcc
gattctttactcaggaccattctcataaggatcacgtgacacactttaaggagaaaactcaacagaagcgtagtcctgta
tcgatgttagaaaaatatcaaaaatacttcggagatatttacaaacaggatgtggagagcatatgcaaaaataatgcgaa
aagccgcgattccgggtcaccgataaaagatgaactagaaaaactagagaaaatgtgcgaaaaagtaaaaagatcgaaca
ctcccgaaaaatcacgagaacgtccggatcctgatgctacggaaagacccgaaagcggaagatccgacgttagcggcgaa
catctcagcagtaaatatcttagcgtggatgatgacaaggaaagtagtgttgagaatgagaaatcatcgtcgtcggcttt
agactcgcttagtagcttcgtttacggtcagttattaacgagtgaacatcctttagacagtctacaaaagcttctgacta
agtccagcattccagcaatgtcaccgtcgcactccgcggtcgtcaagcccatactaagatccgttacgcccgatgttccg
tttccgttaaacctttcattgaagagggaacctgacgatgacgaaaacagcttagaaaaggagaatttttccgaccaaga
caaaatacggcatcntgacaaggaaagtagtgttgagaatgagaaatcatcgtcgtcggctttagactcgcttagtagct
tcgtttacggtcagccattaacgagtgaacatcctttagacagtttacaaaagcttctgactaagtccagcattccagca
atgtcaccgtcgcactccgcggtcgtcaagcccatactaagatccgttacgcccgatgttccgtttccgttaaacctttc
attgaagagggaacctgacgatgacgaaaacagcttagaaaaggagaatttttccgaccaagacagtaatcacagtggta
gcgaaagcgacgcgaatagcgaatatcgctgcgcggcctgtagtagacatttcgcctccaagggttcataccgttatcat
ttaagtcgctgtcatttatcctccgtaaagaaatacggcatcaaagaagcgttcaatatgagcccttacatctacctccc
cctggatcatactgccaaattttctaagtattatgaaatggctcaagagcttgctaacaaagggaaataa

Protein
Protein IDpfu_aug2.0_1027.1_24623.t1
Definition-
>pfu_aug2.0_1027.1_24623.t1
MHSSSVSKPVLHGGTKSDNSTSSASAGDSNSESGESEEDVNNDKVGKLEESTNSDEIPANDQTNRCENDENYVQSAKNEE
IDSFEERSKEDVNCSLTEESIEGTNTTETKMTLKTEDKSPSSSDDDVIKTDTTNELTNEKSKRSETPPLKRLMRQDPLPL
FMRDKGPSPPKKIFREEIYSKHHNVPFLSSPHSSLLKHIPTHPKQAMLKAKHYSNKLLTPFIPFNIPKVVIDDQPLDLSK
KSSSKSIPEFPKKDLPPDTKKSPGKYTNGFLSNVGHSHSSLQSLQKRFGGDIPTKTHRHPMSGMLLNVPPTYMSHNAMHL
PHPVLNSTQTDGCRKISKSQSSPSQSTSKLEKKPEKGESSESKRKSPHNTTDLNSNVTSKSEDSKSTSSKEENSKYTIHK
CSCQKTYNTLYGLSLHLQETGHLPAGTKQASLMEYPKLVRGQDMWLNQESEQTKRILRCIQCGESFKSLPMLTVHMMQTQ
HYTKIVSSEHGRRAHKCSAYCDRDLDRECIFKCKVCNGTFSDMEGLANHMILSGHHKKNLLKHNYMAINLKGKRKRFSSG
EDSIDTTGSSTIASIFEYKRKCLRDSASPIRKRKRFSSGEDSIDTTGSSTIASIFEYKRKCLRDSASPISNGHSRMSDSP
NSDLQEDSRITCENCGERIETGHFVDHVRECLLQSRYESPFTRLKIKKEIDDVTDDAKSNDDVSDKFLTSDEDERTERKP
LKLQLKLEKIEKDEKDRDIKSENGDESEKSLSIDVTSERGKDETKVDSIKTESKLDDDDDDESQNLETHDIDGRKFESKV
IAKAEVSARKHLDIIDPDTAEEQNVDGNSALQAMESFIQRSFSSKFNYRRNSGRFFTQDHSHKDHVTHFKEKTQQKRSPV
SMLEKYQKYFGDIYKQDVESICKNNAKSRDSGSPIKDELEKLEKMCEKVKRSNTPEKSRERPDPDATERPESGRSDVSGE
HLSSKYLSVDDDKESSVENEKSSSSALDSLSSFVYGQLLTSEHPLDSLQKLLTKSSIPAMSPSHSAVVKPILRSVTPDVP
FPLNLSLKREPDDDENSLEKENFSDQDKIRHXDKESSVENEKSSSSALDSLSSFVYGQPLTSEHPLDSLQKLLTKSSIPA
MSPSHSAVVKPILRSVTPDVPFPLNLSLKREPDDDENSLEKENFSDQDSNHSGSESDANSEYRCAACSRHFASKGSYRYH
LSRCHLSSVKKYGIKEAFNMSPYIYLPLDHTAKFSKYYEMAQELANKGK

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495