Gene
| Gene Model ID | pfu_aug2.0_1027.1_24619 |
|---|---|
| Locus | scaffold1027.1 : 22117 ... 35295 : - |
| To GenomeBrowser | scaffold1027.1:22117..35295 |
| Genes list of scaffold | scaffold1027.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| mitochondrial ribosome-associated gtpase 2 | GO:0000166 GO:0043167 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1027.1_24619.t1 | 1 | 1 | GTP1_OBG | 52 | 204 | 2.0e-37 | 128.2 | 7.00005e-41 | 2.6e-37 | 127.8 |
| pfu_aug2.0_1027.1_24619.t1 | 1 | 1 | MMR_HSR1 | 208 | 249 | 1.2e-10 | 41.3 | 5.3e-14 | 1.9e-10 | 40.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1027.1_24619.t1 | gi|530626905|ref|XP_005302975.1| | PREDICTED: mitochondrial ribosome-associated GTPase 2 isoform X1 [Chrysemys picta bellii] | 0.0 |
| pfu_aug2.0_1027.1_24619.t1 | gi|676487184|ref|XP_009064212.1| | hypothetical protein LOTGIDRAFT_168090 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1027.1_24619.t1 | gi|556979767|ref|XP_005996703.1| | PREDICTED: mitochondrial ribosome-associated GTPase 2 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_1027.1_24619.t1 | gi|524870643|ref|XP_005092104.1| | PREDICTED: GTP-binding protein 5-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1027.1_24619.t1 | gi|641790151|ref|XP_008176802.1| | PREDICTED: mitochondrial ribosome-associated GTPase 2 isoform X3 [Chrysemys picta bellii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1027.1_24619.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1027.1_24619.t1 atgaagaagctccctcagtatggtctcacatatttgagacacgtctatatttcccggcagctggagtgtttattcacaca gagaagtagattatccacagctaaaccaatccacccgtccaaacctaagggacatgttgaacaggtaaaacgcttcgtag actttgtaaaggtcaaggtcattggaggtaaaggaggcgatggtagtttggcgtttacgcgtctaccaaagaaggaattt gccggtcctgatggtggtaacggagggaacggtggacatgttatattcacagcttctccagaggtgaaatcttttaatca cttggaaccaatcataaaaggtatggaggggttcaggggcgaacctaaaaattgttatggagctcatgcaaagcatactg aaattaaggttccactcggaaccatattcaacacagaggaaggtgaattcctgacagagcttgacatgttaggtgattat tatgtaggtgccaggggcggggcaggtgggcggggcaataaacacttcctgagtaacgaacagagggcccctgccaaggc ggaaaaaggggcacaaggagaaatgaggacactgtgtttggaacttaaaacaatggcatttgcaggactggtaggatttc cgaatgcaggcaagtcaacattactgagggccatatctagagccagacctaaagtggcagcttacccatttactacactg aatccacatgtgggaacagtacaatacaatttattacaattgcatgacgtcataatgaaaagcggaaccaaaggatgttc attccagtttttttttttaattttggcaagaggtctcttagaagtgttatga |
|
Protein
| Protein ID | pfu_aug2.0_1027.1_24619.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1027.1_24619.t1 MKKLPQYGLTYLRHVYISRQLECLFTQRSRLSTAKPIHPSKPKGHVEQVKRFVDFVKVKVIGGKGGDGSLAFTRLPKKEF AGPDGGNGGNGGHVIFTASPEVKSFNHLEPIIKGMEGFRGEPKNCYGAHAKHTEIKVPLGTIFNTEEGEFLTELDMLGDY YVGARGGAGGRGNKHFLSNEQRAPAKAEKGAQGEMRTLCLELKTMAFAGLVGFPNAGKSTLLRAISRARPKVAAYPFTTL NPHVGTVQYNLLQLHDVIMKSGTKGCSFQFFFLILARGLLEVL |
|