Gene
| Gene Model ID | pfu_aug2.0_1017.1_24610 |
|---|---|
| Locus | scaffold1017.1 : 55959 ... 64795 : - |
| To GenomeBrowser | scaffold1017.1:55959..64795 |
| Genes list of scaffold | scaffold1017.1 |
| Synonym | pfu_aug1.0_5916.1_31072 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| vacuolar protein sorting-associated protein 4-like | GO:0000166 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1017.1_24610.t1 | 2 | 1 | AAA_2 | 65 | 89 | 7.8e-07 | 29.1 | 9.2 | 3900.0 | -2.5 |
| pfu_aug2.0_1017.1_24610.t1 | 2 | 2 | AAA_2 | 162 | 267 | 7.8e-07 | 29.1 | 5.4e-09 | 2.3e-06 | 27.6 |
| pfu_aug2.0_1017.1_24610.t1 | 1 | 1 | RuvB_N | 162 | 235 | 7.4e-06 | 25.1 | 5.2e-08 | 2.2e-05 | 23.6 |
| pfu_aug2.0_1017.1_24610.t1 | 1 | 1 | AAA | 164 | 296 | 2.0e-37 | 128.3 | 8.5e-40 | 3.6e-37 | 127.5 |
| pfu_aug2.0_1017.1_24610.t1 | 1 | 1 | Vps4_C | 366 | 415 | 3.1e-06 | 26.9 | 2.1e-08 | 8.9e-06 | 25.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1017.1_24610.t1 | gi|291238538|ref|XP_002739185.1| | PREDICTED: vacuolar protein sorting-associated protein 4-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1017.1_24610.t1 | gi|676472704|ref|XP_009059576.1| | hypothetical protein LOTGIDRAFT_218616 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1017.1_24610.t1 | gi|390340269|ref|XP_784872.3| | 0.0 | |
| pfu_aug2.0_1017.1_24610.t1 | gi|449676664|ref|XP_002157293.2| | 0.0 | |
| pfu_aug2.0_1017.1_24610.t1 | gi|156355133|ref|XP_001623528.1| | predicted protein [Nematostella vectensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1017.1_24610.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1017.1_24610.t1 atgagtgacgaagtttcactgtaccatgaggctgtgtcgtgcctagaaaacaccctagaagaagggagcaagtcttcaga catagatattcagtcattgtacaataacatcagtagatgtcatgaaattatacacaaactcaatggtgaagagcaggaac aatactattctggcatactgtgtcacctggagtcggctctacattcccaaaagtctttgctgaaatccaaaatagatcaa ctcaacgaacaatctcatactcagacggacaaacagaatggatccacaaaacaagagaaaataccagtagctgatgccca atgtcaaaaccgacgatcagctatagaggataccattataactaagggaggtttgactttttctgacgttgctggactgg aggacgccaaacagacactaagggaggctatcatcatgccgttacaattcccacaactcttcacaggagctgtaaagcca tggaagcggatcctcttatacggacccccggggacgggaaagtcccgcctagctcaagccatatcatcggaaatacagtc cactttctattgtgtgtctagctcggaccttgtttcatcatgggtcggcgaaagtgaaaagttaattaaagaattgttcc accatgcagtcagtcagaaaggcagatcagtgattttcatagatgagattgacagtatttgtcgtcaacgtaactcgcgc gaggaggagtacacgaggcgcatcaaaacagagctcctcaaacaaatggaaggagcagacaactcctctcaaactgacaa aatatttctactctgtgctaccaactgtccatgggaactagattccgccttcctgcgaagatttcaaaagagaatattca ttccgctacctgacaaagtgaccttgaccgaggaggagtggtcacgcctgggtgacgagactaagggattctctggcagc gacatcgctaacatgatactggatgccttgttctgtcctatcagagatatacagaagtcaacaaaatgggtaaagaggcc tgatgggatgtttagtccgtgtttgtcggacaataactccagtacagagtatctaattactgctaccatagcagacctgc ctccagacaagatctcacccagagatgctgtcctaggagactttatggcttctctagcgactcacaaatgtaccgtcaca gccgcggaactggagaagtttgaagagtttacaaaggccatgggagtacgaggatag |
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Protein
| Protein ID | pfu_aug2.0_1017.1_24610.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1017.1_24610.t1 MSDEVSLYHEAVSCLENTLEEGSKSSDIDIQSLYNNISRCHEIIHKLNGEEQEQYYSGILCHLESALHSQKSLLKSKIDQ LNEQSHTQTDKQNGSTKQEKIPVADAQCQNRRSAIEDTIITKGGLTFSDVAGLEDAKQTLREAIIMPLQFPQLFTGAVKP WKRILLYGPPGTGKSRLAQAISSEIQSTFYCVSSSDLVSSWVGESEKLIKELFHHAVSQKGRSVIFIDEIDSICRQRNSR EEEYTRRIKTELLKQMEGADNSSQTDKIFLLCATNCPWELDSAFLRRFQKRIFIPLPDKVTLTEEEWSRLGDETKGFSGS DIANMILDALFCPIRDIQKSTKWVKRPDGMFSPCLSDNNSSTEYLITATIADLPPDKISPRDAVLGDFMASLATHKCTVT AAELEKFEEFTKAMGVRG |
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