Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.1_6568.1_80141
Locus scaffold6568.1 : 30415 ... 30645 : -
To GenomeBrowser scaffold6568.1:30415..30645
Genes list of scaffold scaffold6568.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.1_6568.1_80141.t1 1 1 Gal_Lectin 38 77 3.2e-09 36.9 9.6e-12 1.4e-07 31.6

Transcript
Transcript IDpfu_aug1.1_6568.1_80141.t1
Definition-
>pfu_aug1.1_6568.1_80141.t1
gttgttgtagcaagagaacgcactgatgcaagactgtcatgctcaagaggatccataactattctctccgcaatctatgg
taagggaccaaacggcaaatgggagataggaatggatgaggcgaggggaagatgcaatggtaagaagaggtgcagagtgc
cttcacacaacagggtgttcggcgaccctgcttttggagttgttaaagatctggtcatcgcttatgaatgc

Protein
Protein IDpfu_aug1.1_6568.1_80141.t1
Definition-
>pfu_aug1.1_6568.1_80141.t1
VVVARERTDARLSCSRGSITILSAIYGKGPNGKWEIGMDEARGRCNGKKRCRVPSHNRVFGDPAFGVVKDLVIAYEC

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