Gene
| Gene Model ID | pfu_aug1.0_962.1_58321 |
|---|---|
| Locus | scaffold962.1 : 35745 ... 47025 : - |
| To GenomeBrowser | scaffold962.1:35745..47025 |
| Genes list of scaffold | scaffold962.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_962.1_58321.t1 | 2 | 1 | zf-C3HC4_3 | 13 | 67 | 3.5e-07 | 29.7 | 2.8e-10 | 3.5e-07 | 29.7 |
| pfu_aug1.0_962.1_58321.t1 | 2 | 1 | zf-C3HC4 | 15 | 59 | 7.1e-09 | 35.1 | 5.7e-12 | 7.1e-09 | 35.1 |
| pfu_aug1.0_962.1_58321.t1 | 2 | 1 | zf-RING_2 | 15 | 63 | 2.9e-07 | 30.1 | 2.4e-10 | 2.9e-07 | 30.1 |
| pfu_aug1.0_962.1_58321.t1 | 2 | 2 | zf-C3HC4 | 59 | 81 | 7.1e-09 | 35.1 | 0.089 | 110.0 | 2.5 |
| pfu_aug1.0_962.1_58321.t1 | 2 | 1 | zf-B_box | 101 | 146 | 1.4e-08 | 34.4 | 6.4e-08 | 7.9e-05 | 22.4 |
| pfu_aug1.0_962.1_58321.t1 | 2 | 2 | zf-C3HC4_3 | 102 | 134 | 3.5e-07 | 29.7 | 0.37 | 460.0 | 0.6 |
| pfu_aug1.0_962.1_58321.t1 | 2 | 2 | zf-RING_2 | 104 | 136 | 2.9e-07 | 30.1 | 0.75 | 930.0 | -0.3 |
| pfu_aug1.0_962.1_58321.t1 | 2 | 2 | zf-B_box | 162 | 193 | 1.4e-08 | 34.4 | 4.8e-09 | 6.0e-06 | 26.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_962.1_58321.t1 | gi|291221736|ref|XP_002730877.1| | PREDICTED: tripartite motif-containing protein 2-like [Saccoglossus kowalevskii] | 6.0e-20 |
Transcript
| Transcript ID | pfu_aug1.0_962.1_58321.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_962.1_58321.t1 atggcagcttcaaacacttctccgtttaccgaacttactttgtgccctatttgctttgagggatttaaatgccccaaaac tctgccatgcttacataacttttgtgaatcgtgcatcgggagttatcttgcatcggtatttgagaaagaaaaagataaag ttaagtgtgccagttgtccaatttgccgagcggacgttgaaaagccacaagacgtgaatacatcagaggaatggattaaa tgcctaccgacaaatcatatgttagtcagtatggtcgatgcggtcactggttttcaacatgaaaatatttgcaatttatg cactatcgaaaacaaaaccgaaagtgcagtgtattggtgcgcggattgccgaaaagcactgtgtgaactctgtgaacgta aacattcatacttaatacaaggacacaaagttgaaaatgtaaagcaaatgactgaaatcgaacccaaggcattgagtatc agcgtcaagtgtccacggcacgaagagaaagtgatagaggcgtactgctttgaccacaatgccccttgttgttcatcttg cgttatgattacccatcggaaatgtagcagagtcgaagaagcaaaaattgcagcagaggaattaagaaactcgaaagaga tccttggattacaggaagattttgagattcatagaaagaaaatgggagagctgtcagacaaaactgctgaaaatataaaa tcattcaagaataaagtagccgacattcatagtgagatcacaacgcttcggtcagatataaacaggcatttggacgacat agaactgaaagcaaaacaagaactgaatgcccttgagaaagaacatgtaccagaaatggaagcaactgtacaagtgatgt caggagaaacaaaacgagcagagaatgatttgataatgctgaaggcaagtgtccaatatgcctcagatgagcagtttttg tgcgacattgaaaaaatgagaaatgaatcgaacaaaatcaaagaaatttgggaacaaaacagaacaaagatcaaatacaa gaagttgatctttgaaatgaatgttgaattaaagtatctaaaaaatgtccagaccttcatgcatgtaaacctaacagagg ataagatggtgatggaatcagatccagttgacctactccaggctgagcccgtgaaaatatcacaatttgctatagatgtc aactgttctaacatcacaggatgtgtcatggttgatgacaaaagagtactgtttgcaacatcttcacttaatcgtgttga tatgtatggaatagatgggacgtatctaacttgtcttaaccttggaaatcaggcatggggcgtcgatgttattgacaaga atactggagttgcaacaatgcgggctgcaggaaaggtaccctgtagtcggtcaaagaagaaaataatagtgtaa |
|
Protein
| Protein ID | pfu_aug1.0_962.1_58321.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_962.1_58321.t1 MAASNTSPFTELTLCPICFEGFKCPKTLPCLHNFCESCIGSYLASVFEKEKDKVKCASCPICRADVEKPQDVNTSEEWIK CLPTNHMLVSMVDAVTGFQHENICNLCTIENKTESAVYWCADCRKALCELCERKHSYLIQGHKVENVKQMTEIEPKALSI SVKCPRHEEKVIEAYCFDHNAPCCSSCVMITHRKCSRVEEAKIAAEELRNSKEILGLQEDFEIHRKKMGELSDKTAENIK SFKNKVADIHSEITTLRSDINRHLDDIELKAKQELNALEKEHVPEMEATVQVMSGETKRAENDLIMLKASVQYASDEQFL CDIEKMRNESNKIKEIWEQNRTKIKYKKLIFEMNVELKYLKNVQTFMHVNLTEDKMVMESDPVDLLQAEPVKISQFAIDV NCSNITGCVMVDDKRVLFATSSLNRVDMYGIDGTYLTCLNLGNQAWGVDVIDKNTGVATMRAAGKVPCSRSKKKIIV |
|