Gene
| Gene Model ID | pfu_aug1.0_9359.1_53343 |
|---|---|
| Locus | scaffold9359.1 : 11186 ... 17763 : + |
| To GenomeBrowser | scaffold9359.1:11186..17763 |
| Genes list of scaffold | scaffold9359.1 |
| Synonym | pfu_aug2.0_235.1_17155 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9359.1_53343.t1 | 2 | 1 | HSP20 | 87 | 165 | 1.4e-29 | 101.9 | 7.0e-18 | 3.5e-14 | 52.5 |
| pfu_aug1.0_9359.1_53343.t1 | 2 | 2 | HSP20 | 283 | 364 | 1.4e-29 | 101.9 | 8.8e-18 | 4.4e-14 | 52.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9359.1_53343.t1 | gi|328699752|ref|XP_001949486.2| | PREDICTED: alpha-crystallin B chain isoform X2 [Acyrthosiphon pisum] | 2.0e-16 |
Transcript
| Transcript ID | pfu_aug1.0_9359.1_53343.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9359.1_53343.t1 atggctcaccgcattcctatccatcaggacgaccttagcttcgaggaacgacagaacaaagtatgggaggacatggagaa agacatggaacgacgtagacaggagtgggaggacgaaatagaacgcatgcgcagtgatttctttcagctgaagccaaatt ctaacgggaaactagacgctctcactgataaaataagtgtgaaagacacaatggatgatacaaaaacagttattgaaaaa gaccacaatggaagacctgtgttccgggcaaggttcaacgtccatgaatacaaaccggaagaggtcaacgtcaaaatgga cgctgacaagcttatagtgtacgcaaagcacgaggagaaggacggacataaatctgttagtagggaatttagcagggagg ttaatatccccaaagaggtggatcctatggcgttacagtgtacaatatctaaagacggaatcctgaccgccgaggcacct atgccggtaccggggtaccaacaaatcaccgactctggatacggcacacagcgcataattcctacggctactccccttgt atcaagtcccccgtcccggaatgtccccaccgtaatgccgtcacaaacaggagtacctaccacccatacctctactttta cgacatttatgtcgccaaaaggtgcgacttcgacgccagcacctccaccgccatcttactccaccggaaccggaagtacg catcagtccaccaatgctaacagtgtacacaggtctttctcgccgcagtcaagcgtttcatcgcacgtttcgtcgagctc caaatatgaaacgcgaagtggttccggttcaccgcacagtatgatgtcggaacgtgacaagaggtaccgcgttgaaatcg acatcgaggatttcaatccagaagacttaaatataaaaactgtggataaaaagttggttattactgccaggaaagaggag agagtcggttcgcgtacgtcaagcaaagaacttaatagagagtttacgcttcccgacacggtcgacccaatgcaagtcaa agctttcttttccgattccgggaaacttctcgtggaggctccttatttgcgctctatcacagtcagtcacgagggtagcc cacattttggtacatcttcccctctcagtggatcattgatcagataa |
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Protein
| Protein ID | pfu_aug1.0_9359.1_53343.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9359.1_53343.t1 MAHRIPIHQDDLSFEERQNKVWEDMEKDMERRRQEWEDEIERMRSDFFQLKPNSNGKLDALTDKISVKDTMDDTKTVIEK DHNGRPVFRARFNVHEYKPEEVNVKMDADKLIVYAKHEEKDGHKSVSREFSREVNIPKEVDPMALQCTISKDGILTAEAP MPVPGYQQITDSGYGTQRIIPTATPLVSSPPSRNVPTVMPSQTGVPTTHTSTFTTFMSPKGATSTPAPPPPSYSTGTGST HQSTNANSVHRSFSPQSSVSSHVSSSSKYETRSGSGSPHSMMSERDKRYRVEIDIEDFNPEDLNIKTVDKKLVITARKEE RVGSRTSSKELNREFTLPDTVDPMQVKAFFSDSGKLLVEAPYLRSITVSHEGSPHFGTSSPLSGSLIR |
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