Gene
Gene Model ID | pfu_aug1.0_9303.1_53327 |
---|---|
Locus | scaffold9303.1 : 657 ... 17735 : - |
To GenomeBrowser | scaffold9303.1:657..17735 |
Genes list of scaffold | scaffold9303.1 |
Synonym | pfu_aug2.0_830.1_01173 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_9303.1_53327.t1 | 3 | 1 | Calpain_III | 84 | 112 | 3.3e-28 | 98.1 | 0.2 | 720.0 | -0.3 |
pfu_aug1.0_9303.1_53327.t1 | 3 | 2 | Calpain_III | 131 | 259 | 3.3e-28 | 98.1 | 3.9e-22 | 1.5e-18 | 66.8 |
pfu_aug1.0_9303.1_53327.t1 | 3 | 3 | Calpain_III | 284 | 322 | 3.3e-28 | 98.1 | 9.3e-11 | 3.4e-07 | 29.9 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues | |
Dshape | 1 |
Transcript
Transcript ID | pfu_aug1.0_9303.1_53327.t1 |
---|---|
Definition | - |
>pfu_aug1.0_9303.1_53327.t1 atggggtgtggggcctcatctgatacccactctggcccggagtatggacaatattcaacatttggatacaacggaaatgt tacccaaaacaatacaaaaactgaagacaacaaaaaggccgccgcgccgacggacgaaactatctacggagagaacattg atttcactgatgatcaaaaacgcttagaagagctcaagcgtcaacaagatgcacaggatgataatgcgcgtgcgcaggat aaagaagaccgacctcacgatgcggctatagccgccgctctcattgcacgtcaacaacaggaagaggaagaaaggaggag ggaggaagaagagcgaagacggaaggagcaggagagaattgaggcagaaaacaaaagacgctatgtggccagtatttatg gacagtggaagggggaggaagctgcaggtttccaaaagaaaatccagaatcctaaatactccttccgcgttggaaacgat tgtgctgacatggagggaaaggtacctatagttgttcaaataattcagcgcacaaagaagaggaaagctaaccacccatc tatacgctgtgatttatataaggttctaaacagagattcaaatgatcaaattgtggtcatggcattaggtaaggatagga cgacctaccgttcagacatgcaggtttgttaccggttccaggtgtcaccaggggaatattgtgccgtcccgtccacgatt gaaggaggaatagagaaggaattcatgataagagtcttcacaagtgggcctatatcagatatcaggcacatagatagcga cctgaccattcaagagctcacagactcgcctgatccgtgcttagaatgtagccagtgtttggttggacaatggattagcg gccagaatgctggtggtcaagtgtcaaggcagacattccatacaaaccctcagttccatatcgatgtaccaaatcacggt gagtacgatgtcatctgtagaataaggcattccgatttacgctattaa |
Protein
Protein ID | pfu_aug1.0_9303.1_53327.t1 |
---|---|
Definition | - |
>pfu_aug1.0_9303.1_53327.t1 MGCGASSDTHSGPEYGQYSTFGYNGNVTQNNTKTEDNKKAAAPTDETIYGENIDFTDDQKRLEELKRQQDAQDDNARAQD KEDRPHDAAIAAALIARQQQEEEERRREEEERRRKEQERIEAENKRRYVASIYGQWKGEEAAGFQKKIQNPKYSFRVGND CADMEGKVPIVVQIIQRTKKRKANHPSIRCDLYKVLNRDSNDQIVVMALGKDRTTYRSDMQVCYRFQVSPGEYCAVPSTI EGGIEKEFMIRVFTSGPISDIRHIDSDLTIQELTDSPDPCLECSQCLVGQWISGQNAGGQVSRQTFHTNPQFHIDVPNHG EYDVICRIRHSDLRY |