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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_9263.1_09920
Locus scaffold9263.1 : 3021 ... 11365 : -
To GenomeBrowser scaffold9263.1:3021..11365
Genes list of scaffold scaffold9263.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_9263.1_09920.t1 2 1 OTCace 2 11 1.1e-39 135.8 0.59 4300.0 -2.6
pfu_aug1.0_9263.1_09920.t1 1 1 OTCace_N 13 71 1.7e-17 63.3 4.2e-21 3.1e-17 62.5
pfu_aug1.0_9263.1_09920.t1 2 2 OTCace 76 225 1.1e-39 135.8 2.39622e-43 1.8e-39 135.1

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_9263.1_09920.t1 gi|242002962|ref|XP_002422558.1| carbamoyl-phosphate synthase, putative [Pediculus humanus corporis] 0.0

Transcript
Transcript IDpfu_aug1.0_9263.1_09920.t1
Definition-
>pfu_aug1.0_9263.1_09920.t1
atgttaaacgattgtgacgtcatttatttccttgaaaaagacactgtacagaccatggcaggatactcggatgtattagt
gattcgtcacccttcccctggagttgttactacggctgccagtagatgtcgaaagcctgtgattaacgctggggacggaa
tcggtgaacacccgacacaggccctgctagatgtgtttactatacgtgaggaaatcggtacagtgaatggactaacgatt
acaatggttggagaccttaagaatggccgtaccgtacactcgttggctcgtctccttacccattaccgagtaaagctgtg
ctacgtatccccaccgtccctgaaaatgccggacgatgtcaaacagtacgttacggagaaggaaattcgacaggaggaac
tcacccaacttgaagacatactccccgagactgatgtactgtacatgactagaattcagaaagaacgatttacatccgag
gatgaatataataaggtgtgcggtcagtatgtggtcagtccggagatcatgagaaaggccaagaaaaagatggtggtcat
gcacccgttgccgagacttgacgaaatacatcccgagtttgacacggatccaagagctgcctatttccgtcaggctgaga
atggaatgtatatcaggatggccctactcgctcttgttatgggtcgatgctga

Protein
Protein IDpfu_aug1.0_9263.1_09920.t1
Definition-
>pfu_aug1.0_9263.1_09920.t1
MLNDCDVIYFLEKDTVQTMAGYSDVLVIRHPSPGVVTTAASRCRKPVINAGDGIGEHPTQALLDVFTIREEIGTVNGLTI
TMVGDLKNGRTVHSLARLLTHYRVKLCYVSPPSLKMPDDVKQYVTEKEIRQEELTQLEDILPETDVLYMTRIQKERFTSE
DEYNKVCGQYVVSPEIMRKAKKKMVVMHPLPRLDEIHPEFDTDPRAAYFRQAENGMYIRMALLALVMGRC

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