Gene
| Gene Model ID | pfu_aug1.0_9260.1_17456 |
|---|---|
| Locus | scaffold9260.1 : 11358 ... 16955 : - |
| To GenomeBrowser | scaffold9260.1:11358..16955 |
| Genes list of scaffold | scaffold9260.1 |
| Synonym | pfu_aug2.0_4999.1_32732 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_9260.1_17456.t1 | 1 | 1 | Sulfate_transp | 72 | 351 | 0.0 | 207.6 | 0.0 | 0.0 | 207.1 |
| pfu_aug1.0_9260.1_17456.t1 | 1 | 1 | STAS | 415 | 652 | 2.0e-23 | 82.0 | 1.0e-26 | 5.1e-23 | 80.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_9260.1_17456.t1 | gi|224093041|ref|XP_002188389.1| | PREDICTED: prestin [Taeniopygia guttata] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_9260.1_17456.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9260.1_17456.t1 atgggaactagtgccgtcatttgcatggtcacagcaagcgtcgtcgatcgtcaagccgaaatatttaaagaaaattatgt gtataatgcaacaattactaaccagagcaaacttaatgatgaaatagactgggaatctattccagaatttatggactaca aggaaaatgttgcaatgaacatagcacttttctccggtttgatacttctcataatgggacttttgaagctgggattcata actgcttatctttccgagtcattcttcgcgggatttacatccggggcagccgttcatatagcaaccagtcaaattccagc cattctaggattaaagatccaaaggtacgggggagcgtttaaaatactctatacatacaatgaaatactcagtcatataa ctgaggctaacttagcaacaattcttattggaattatgagtatgacaattgtctttattatcaaagatatcatcaacgaa aaattcaaagaaaaactttttataccgattcctggtgagttactcgtggtcatactggcgactcttatttcgttcttagg tcatttcgaagaaaatttctctgtcgatgtagttggacatattccaaatgacatgcctctcccggtagcaccaaaaataa ttgtttttgaaatgttctatgcagaatgttttgttattgccattctcatatttgccaatactatagccatggcgaagata tgtgcgaagaaacacaattatgaaatagatgataatcaagaagtatttgcatatggaatgtgtaattttatcggcgcttt ttttaaatgtctcccgtccgctgtagctccaccgcgctctatggttgcctcttctatgaacgtaagaacaacattgaatg gaatatttgccatgcttcttatgttacttgtgattttagtgttaagtatgctattttatccgcttcccaaatccgcacta gcagccattatcgtcattgctttgaagggacttttcgttcagatacttgtttttaagaaattctggaaaataaacaaatt tgatttcatgatatggttgtccacaatcgtatctgtagtctttctagacatcgactatgggttgtatattggggtctgtg tatcacttattaccgttatatggcaaagtcagcactccagagctacgccagtttgggtaacagaggaaatactagtcttg gacaaatatggaaagccagagctgcgtaaaaagttcaacgatagcggaattaaaatatttaagtttcagtccagtctttt ctttgcaaatgctgaaatattcagacagaaactttataagagaactgtgaatccaagaaagataatgaaattattacgga agaagcaaacattaatgaagaagactccttcatcgcgacaggtttcggaaatgtctacaaatcctacaggtggaaataca aatgatgcgtattcaaaagacaatccagacgatataaagagagcaatggaagagagtgttccacagatttctgtgattga aagtgagcccacagctaatgtctctgatggcaaggataacacatcagacatttcatgtgagataggtgatatccacaaat atgactacttaaatataccaataaatctgcggaaccgcaaaataagtcaagcatctagcgtatttacagtaggtacggag gattccggctacgatgaagatgaagagtttgcgaatcctctggttcggctgaaggaatttcagaaaacacggtttatcat aatagactgttctccaatcaactacctcgatgtgtcaggtgccagtgtacttggtcacatccatacagaatatgaaaatg tcggtataaaggtgctgcttgcgggatgtgcgcgtgatgtagtccaatcgatggagtgtgcatcggtttttgataagata ccacgacaaaatgtgtaccaaacaatgacggaggccgtccattcagcagagggtcaattaattaacagcaatggtagaaa acctattagtagagctgcaagttttacgtttgaggaagcagtagaggactcatacgcagccaatacttcgtga |
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Protein
| Protein ID | pfu_aug1.0_9260.1_17456.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_9260.1_17456.t1 MGTSAVICMVTASVVDRQAEIFKENYVYNATITNQSKLNDEIDWESIPEFMDYKENVAMNIALFSGLILLIMGLLKLGFI TAYLSESFFAGFTSGAAVHIATSQIPAILGLKIQRYGGAFKILYTYNEILSHITEANLATILIGIMSMTIVFIIKDIINE KFKEKLFIPIPGELLVVILATLISFLGHFEENFSVDVVGHIPNDMPLPVAPKIIVFEMFYAECFVIAILIFANTIAMAKI CAKKHNYEIDDNQEVFAYGMCNFIGAFFKCLPSAVAPPRSMVASSMNVRTTLNGIFAMLLMLLVILVLSMLFYPLPKSAL AAIIVIALKGLFVQILVFKKFWKINKFDFMIWLSTIVSVVFLDIDYGLYIGVCVSLITVIWQSQHSRATPVWVTEEILVL DKYGKPELRKKFNDSGIKIFKFQSSLFFANAEIFRQKLYKRTVNPRKIMKLLRKKQTLMKKTPSSRQVSEMSTNPTGGNT NDAYSKDNPDDIKRAMEESVPQISVIESEPTANVSDGKDNTSDISCEIGDIHKYDYLNIPINLRNRKISQASSVFTVGTE DSGYDEDEEFANPLVRLKEFQKTRFIIIDCSPINYLDVSGASVLGHIHTEYENVGIKVLLAGCARDVVQSMECASVFDKI PRQNVYQTMTEAVHSAEGQLINSNGRKPISRAASFTFEEAVEDSYAANTS |
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