Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_91643.1_06169
Locus scaffold91643.1 : 863 ... 1780 : +
To GenomeBrowser scaffold91643.1:863..1780
Genes list of scaffold scaffold91643.1
Synonym pfu_aug2.0_762.1_07857

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_91643.1_06169.t1 1 1 Melibiase 25 84 9.6e-08 31.1 1.5e-11 1.1e-07 30.9

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_91643.1_06169.t1 gi|268370285|ref|NP_001161200.1| alpha-N-acetylgalactosaminidase precursor [Gallus gallus] 8.0e-30

Transcript
Transcript IDpfu_aug1.0_91643.1_06169.t1
Definition-
>pfu_aug1.0_91643.1_06169.t1
atgggatggttgtcatgggaacgattccgatgtaacgtggactgtaagaagcaacctaaagaatgcatcagtgagaatct
gtacaaagcaatggccgaccgaatggtttctgacggctatatttactatggttacaagtatgttaatattgatgattgct
gggcgtcaaaggaaagaactccggacggaaagcttgcgccggatccggaaagattcccaagtggaataaaagctcttgca
gactacgtaaattttattcatcaatag

Protein
Protein IDpfu_aug1.0_91643.1_06169.t1
Definition-
>pfu_aug1.0_91643.1_06169.t1
MGWLSWERFRCNVDCKKQPKECISENLYKAMADRMVSDGYIYYGYKYVNIDDCWASKERTPDGKLAPDPERFPSGIKALA
DYVNFIHQ

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