Gene
| Gene Model ID | pfu_aug1.0_915.1_43851 |
|---|---|
| Locus | scaffold915.1 : 77756 ... 90815 : + |
| To GenomeBrowser | scaffold915.1:77756..90815 |
| Genes list of scaffold | scaffold915.1 |
| Synonym | pfu_aug2.0_906.1_21256 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_915.1_43851.t1 | 1 | 1 | FRG1 | 3 | 171 | 0.0 | 208.5 | 0.0 | 0.0 | 208.4 |
| pfu_aug1.0_915.1_43851.t1 | 2 | 1 | Fascin | 19 | 93 | 9.3e-10 | 38.5 | 4.3e-13 | 2.1e-09 | 37.4 |
| pfu_aug1.0_915.1_43851.t1 | 2 | 2 | Fascin | 126 | 154 | 9.3e-10 | 38.5 | 0.8 | 4000.0 | -2.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_915.1_43851.t1 | gi|348524462|ref|XP_003449742.1| | PREDICTED: protein FRG1-like isoform 1 [Oreochromis niloticus] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_915.1_43851.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_915.1_43851.t1 atgcaacgagatggacctgagccagaagaaatccttacagcagtaaaagtcaatgatacaaaaatagctctgaagtcagg atatggtaaatacctatcagtagagccaggtgggacagtgagtgggaaggcagaggccatcagtgtaagagaacagtggg aacctgttatacaagagggtaaaatggcattaaatggcagcaatggtaaattcatggcaccgaatgatgaggatgacata gtttgtgaatcatctactgcgggggattcagaaatgttaaagatcagattaaatttgactctagaggtggatccaatgga gaatataccaaaagaagagagaggaaaaattaaagaaacagaaatcaattatgtgaagaagtttcagagtttccaagaca gaaggttacgggtaaatgaaggagacgtatctcagatcaaaaaggcaaagaaagatggaacattacatgaatgtttgtta gacaggagagaaaagatgaaagcagatcgatattgcaagtga |
|
Protein
| Protein ID | pfu_aug1.0_915.1_43851.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_915.1_43851.t1 MQRDGPEPEEILTAVKVNDTKIALKSGYGKYLSVEPGGTVSGKAEAISVREQWEPVIQEGKMALNGSNGKFMAPNDEDDI VCESSTAGDSEMLKIRLNLTLEVDPMENIPKEERGKIKETEINYVKKFQSFQDRRLRVNEGDVSQIKKAKKDGTLHECLL DRREKMKADRYCK |
|