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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_913.1_43844
Locus scaffold913.1 : 22476 ... 27356 : +
To GenomeBrowser scaffold913.1:22476..27356
Genes list of scaffold scaffold913.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_913.1_43844.t1 1 1 Sulfate_transp 67 155 1.8e-11 43.5 5.1e-15 1.9e-11 43.5

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_913.1_43844.t1 gi|206149603|gb|ACI05563.1| anion exchanger SLC26A6 [Danio rerio] 4.0e-11

Transcript
Transcript IDpfu_aug1.0_913.1_43844.t1
Definition-
>pfu_aug1.0_913.1_43844.t1
atgatcggggcagtcgtcactaacggtcttgagaaatacagacacaccctccccgtggtatcaacaccagagtcaacgac
cctgatcaccaaccacacctataatatcaccgtcaactccagcgtggagataaccacgccacatgtaatcacggagcagg
acgtccacgacgctgagatacagacgaaggtggcttttgccatgtctgtgtcttttctggctggtctcatgcaggtggtg
gcggcgactgttatatctcactatacccggataaaccaagagttccaggtggaggtagtgggggtcattcctgttgggtt
gcctccaccaaatatgaagaaccttgtgtatgcgccagaactgataggggatgccattggcatagcctttgtggcatttg
ccacatcgtatgccatggcaaaaatcctggcagagaaaagcaaggaggatatcaatgcaaatcaggttgttatatgttta
attttgtcctaa

Protein
Protein IDpfu_aug1.0_913.1_43844.t1
Definition-
>pfu_aug1.0_913.1_43844.t1
MIGAVVTNGLEKYRHTLPVVSTPESTTLITNHTYNITVNSSVEITTPHVITEQDVHDAEIQTKVAFAMSVSFLAGLMQVV
AATVISHYTRINQEFQVEVVGVIPVGLPPPNMKNLVYAPELIGDAIGIAFVAFATSYAMAKILAEKSKEDINANQVVICL
ILS

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