Gene
| Gene Model ID | pfu_aug1.0_8519.1_38771 |
|---|---|
| Locus | scaffold8519.1 : 8476 ... 17308 : + |
| To GenomeBrowser | scaffold8519.1:8476..17308 |
| Genes list of scaffold | scaffold8519.1 |
| Synonym | pfu_aug2.0_469.1_30802 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8519.1_38771.t1 | 1 | 1 | CH | 8 | 93 | 3.5e-17 | 62.3 | 1.7e-20 | 8.5e-17 | 61.1 |
| pfu_aug1.0_8519.1_38771.t1 | 1 | 1 | CAMSAP_CH | 8 | 71 | 6.7e-10 | 38.4 | 3.2e-13 | 1.6e-09 | 37.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8519.1_38771.t1 | gi|291226587|ref|XP_002733277.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 3 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_8519.1_38771.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8519.1_38771.t1 atggcggacggttaccgggacgtagaggtcagggacatgacctcgtcctggaaggacggccttgctttctgtgccatcat ccatcgtcatcgtccagacttgatagattatgatgccctctccaaagagaatatttttgataacaatcagctggcgtttg aggtagcagagaaggagttaggaataccggccctacttgacgctccagacatggtggccatcagggtcccagacaaactc agcgtggttacatacgtatcacagtattacaattacttctgtaataaaccacagctgggtggtcctggagtgaagaagcc aaatacactgaagagaacccaggctacaccaacgggacctgatgctaaacgacagtcccttggacctaatgatgggaccc cgaacaaggacagacaagtttcaatgggagacaaatgtgccatatgtcataagaaggtataccttttagaacgtcacgta aatgaaggacagctctatcataggacttgtttcaggagtagtgataattcccctcaaagaaaaatcaataaacgtttaga tgccatgggcgaccgagaaagtgatgagaagaaatcattgcaggataaaaaaggtgaagaaccaaatttctggaagagaa gagctgatgctaaaaagactgagagcaaatcaaacggacacgtaaacagtgacgctgataaaggacaagtgcctaacaaa aaacatgacagtagtggagtcttaagttcccttgtgcataatttgaaagggagtgattctaaatctaagcaaccctcaca acataatgctcctacagaaacaagtgacaaaacaaaagataatgtgacatcacggcctgcagatctgaaactagattctc atagtgttgatattaagaataataaaaaccttgattctgttggtgggactaccaagagtgaacctgatgtgaaagtgaat gttgtccctcctcgaccgagggcaagacatgtagctaaaattggtgcttataaagaaaaacgtgaagaagaacctatgga tacttcacattcttcagatgatatacaaactaaaagacagagtactgggaatgtcctagatagaacaaagccgacaaata aaacagaagggaagaaggaagaacagaaaagtgtggtagctccgccaagagcaagacatgttgttaaaatcactgctaaa aaggaggagtctgatgttcgtgagcgatcaaaatctccgttacaatcaaagcctgttcctagtgcacggacacctgagag tctttcaaaaactggtgctaagaatgacgaggattcaagtgcaaataaacattcaatgtcccctatgtataagtcatcta ctactacaaaaacaccagagagcccccctcccttgccatcctctctcccacctactgtaaaaccttcaacaccctcatcc ccaccccctcttccttcaaatttgcctcctcagcttaaatcatctcctctctcacccatcagtctgccctcatcaagggg taaatcacctcccagaacagattcatcccattcaaacaaaaattctcaaatacatgaactaaactcaaaagaatctccaa aggcaaaaccaagacatgcaaaaacagctgttgaaagtaaagcaaaagagaaaaatgattctgcatcttcaattgtcagt ccaacaaaacaagatcaagaattgttaggtggactattgaaaaatttggctgacattcgacaaagaaagtcttcatcaga atcaaatgataaatcaccattgtctcctactcagggcctgagttcaaaactgcaaaacattcaagaaagtaaagaaggta gaagggatattaaaagcttagacattgatgctgaaaagaaaaaagatagagcaggaaaagctaaatcagacttcttgtct ggaaaattatccgttttctctagcgaatctgaaagtgtcagtgatagacctaagactgagaaaaaagttaagtcagattt caattcaaatgaggatgatgatattcctgcatggaaaaaagcattagaagaaagaaagaagaaaaacttaagaccaaagt cagaggctgtattgaatgaagaatctcaagtaaatgagccggcatggaaaagtggtctgaataaaaagaatgcaaacaga ccaaaatcaatggatatattgtctgagattgacaaagagaaagatcaaaagccagcatggcagcttgaagcagaaaagcg aatggctgccaacgaaaaaaaatttgttgatccagagaaaaaccgaatagatcaaggtgtaaagaaaaatgagaaaacag ataacagcaaaccgagaccttatactgcatatggggaacttgagagcaaaagtaaatcaccagtgtctggaaaggtaact gacaatagtgaaagcaaggtaaagagcagaattcttccaactgctcctagtgacagtaaacaatcagagaccgaaaaaaa gaaaatttctgtggacactaaatttagttttaacttgaatttcaaagacaaagaaaaggaaaaggaccctggtaaaccac ccagaccaccaactagccctgctgcactgaaatcaaagataggaacagcagaagatgacaggtcttccatacactccccg cccctcaggcccccggcacccaggtcaacagaggtcaagacattcggggatgtaaagagactcactcccagagaaattca gaagcagttatcagaaattgaccatcgcctgactgacctagagataaggggaagaactctggaggattccatcagaaaag gtttgtacctgagtgtatacagtcctatatatattctaagcttggcttga |
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Protein
| Protein ID | pfu_aug1.0_8519.1_38771.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8519.1_38771.t1 MADGYRDVEVRDMTSSWKDGLAFCAIIHRHRPDLIDYDALSKENIFDNNQLAFEVAEKELGIPALLDAPDMVAIRVPDKL SVVTYVSQYYNYFCNKPQLGGPGVKKPNTLKRTQATPTGPDAKRQSLGPNDGTPNKDRQVSMGDKCAICHKKVYLLERHV NEGQLYHRTCFRSSDNSPQRKINKRLDAMGDRESDEKKSLQDKKGEEPNFWKRRADAKKTESKSNGHVNSDADKGQVPNK KHDSSGVLSSLVHNLKGSDSKSKQPSQHNAPTETSDKTKDNVTSRPADLKLDSHSVDIKNNKNLDSVGGTTKSEPDVKVN VVPPRPRARHVAKIGAYKEKREEEPMDTSHSSDDIQTKRQSTGNVLDRTKPTNKTEGKKEEQKSVVAPPRARHVVKITAK KEESDVRERSKSPLQSKPVPSARTPESLSKTGAKNDEDSSANKHSMSPMYKSSTTTKTPESPPPLPSSLPPTVKPSTPSS PPPLPSNLPPQLKSSPLSPISLPSSRGKSPPRTDSSHSNKNSQIHELNSKESPKAKPRHAKTAVESKAKEKNDSASSIVS PTKQDQELLGGLLKNLADIRQRKSSSESNDKSPLSPTQGLSSKLQNIQESKEGRRDIKSLDIDAEKKKDRAGKAKSDFLS GKLSVFSSESESVSDRPKTEKKVKSDFNSNEDDDIPAWKKALEERKKKNLRPKSEAVLNEESQVNEPAWKSGLNKKNANR PKSMDILSEIDKEKDQKPAWQLEAEKRMAANEKKFVDPEKNRIDQGVKKNEKTDNSKPRPYTAYGELESKSKSPVSGKVT DNSESKVKSRILPTAPSDSKQSETEKKKISVDTKFSFNLNFKDKEKEKDPGKPPRPPTSPAALKSKIGTAEDDRSSIHSP PLRPPAPRSTEVKTFGDVKRLTPREIQKQLSEIDHRLTDLEIRGRTLEDSIRKGLYLSVYSPIYILSLA |
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