Gene
| Gene Model ID | pfu_aug1.0_8412.1_45855 |
|---|---|
| Locus | scaffold8412.1 : 1356 ... 27426 : + |
| To GenomeBrowser | scaffold8412.1:1356..27426 |
| Genes list of scaffold | scaffold8412.1 |
| Synonym | pfu_aug2.0_151.1_03711 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8412.1_45855.t1 | 4 | 1 | Na_trans_assoc | 16 | 85 | 7.9e-31 | 107.8 | 0.52 | 2600.0 | -1.9 |
| pfu_aug1.0_8412.1_45855.t1 | 4 | 1 | Ion_trans | 156 | 343 | 0.0 | 341.6 | 2.24208e-44 | 1.10001e-40 | 139.0 |
| pfu_aug1.0_8412.1_45855.t1 | 6 | 1 | PKD_channel | 157 | 201 | 1.4e-07 | 30.3 | 0.00014 | 0.7 | 8.2 |
| pfu_aug1.0_8412.1_45855.t1 | 6 | 2 | PKD_channel | 213 | 351 | 1.4e-07 | 30.3 | 0.00036 | 1.8 | 6.8 |
| pfu_aug1.0_8412.1_45855.t1 | 4 | 2 | Na_trans_assoc | 361 | 424 | 7.9e-31 | 107.8 | 5.2e-12 | 2.6e-08 | 34.1 |
| pfu_aug1.0_8412.1_45855.t1 | 4 | 3 | Na_trans_assoc | 446 | 556 | 7.9e-31 | 107.8 | 2.4e-27 | 1.2e-23 | 84.3 |
| pfu_aug1.0_8412.1_45855.t1 | 6 | 3 | PKD_channel | 577 | 624 | 1.4e-07 | 30.3 | 0.0011 | 5.3 | 5.3 |
| pfu_aug1.0_8412.1_45855.t1 | 4 | 2 | Ion_trans | 583 | 623 | 0.0 | 341.6 | 7.1e-13 | 3.5e-09 | 36.1 |
| pfu_aug1.0_8412.1_45855.t1 | 4 | 3 | Ion_trans | 622 | 675 | 0.0 | 341.6 | 7.2e-13 | 3.6e-09 | 36.1 |
| pfu_aug1.0_8412.1_45855.t1 | 6 | 4 | PKD_channel | 648 | 681 | 1.4e-07 | 30.3 | 0.042 | 210.0 | 0.0 |
| pfu_aug1.0_8412.1_45855.t1 | 6 | 5 | PKD_channel | 717 | 779 | 1.4e-07 | 30.3 | 5.0e-05 | 0.25 | 9.7 |
| pfu_aug1.0_8412.1_45855.t1 | 4 | 4 | Ion_trans | 733 | 933 | 0.0 | 341.6 | 0.0 | 5.60519e-44 | 149.7 |
| pfu_aug1.0_8412.1_45855.t1 | 6 | 6 | PKD_channel | 785 | 939 | 1.4e-07 | 30.3 | 8.6e-10 | 4.2e-06 | 25.4 |
| pfu_aug1.0_8412.1_45855.t1 | 4 | 4 | Na_trans_assoc | 1094 | 1145 | 7.9e-31 | 107.8 | 0.39 | 1900.0 | -1.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8412.1_45855.t1 | gi|322795001|gb|EFZ17857.1| | hypothetical protein SINV_07049, partial [Solenopsis invicta] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_8412.1_45855.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8412.1_45855.t1 atgaagaaagacagtacacatcttttacccgacgtcgtggtagatcatggaaaatccgacgatgaattaagtgactatca taaaaaggaaactaacggagattcccagaagttcaaccataaccagatctgtcatcgacatggtagcaaagatgtagatc ccaaagatatgatggtgttaaaggatttattggacaacgcggaaggaaaaagaagaccaagtatgctgtcggacctcagc ctgggggagcacgaagaagaggcgttacgtgacagattgtaccgcaaattctgtagttggacatgctgtccgtgttactt aaaatttcagaaaattgtggcccttttcatcctggatgcattcatggaccttttcattacgctgtgtatcgttatgaata cagcctttatggccattgaccaccatggaaaaagcgaggaactcggagtggttctggaaacaggcaactcggtttttacc tggatatttgcggcggaggcatttttgaaaattatagcattaaatccggtacaatacgtaaaagacggatggaactgttt tgatattctcattgtgatgttaagctttttagaattaattttgggcggatctggtctttctgttcttagaagcttccgtt tgctccgtgtgttcaaacttgccaaatcttggccaactctaaatatgttaattagtatagtggcccaaaccatgggtgct ttaggtaatttaacgttcgtgttaggcatcgtagtgtttatttttgccgttatgggacaacagttgttcatgccagctta cgaattgtacggcaagaatggcacggaatttgctgatgaagaacctagcccgcggtggagtttcaaggattttctacatt cgtttatgatagtgtttagagtcctatgtggagagtggatcgaatccatgtggtcgtgtacccgggtggccgactggccc tgtattccgtttttcctcctgacgatggtcataggaaaccttgtggtgttgaatctgtttcttgctttgttattgagctc gtttgaccaggtgagcggcggggacgacacggattctgaggataaagaacctaataaaatcgctgaagcaattaaccggt ttaaaagatttggatcgtgggtgaaagttcagatcatcgtttgtctaaaaatgagaattcgccggaagtcaaaaccacct gtcgcttcatcgtctcctaaagaatccagaatcgatgtcaacggaaaaccggaagtgatatcagacggtcataccgtaat cgaaacaaccgctctattagagaattatgaaaaagactttgcttggaaatcacaaaaattctttcatccattccagaaat ataaacgaaaaggaagtcagggttctatatcgaaatcaggggcctcgtcgtcaagttcaccttcggacgaggatacgaaa ctaagcctcacgaaggtcaacgccgacggtgaaccggaaatcaacgaagttgacgtcacatatgccagttacccggatga ctgtttttgtaaaatttgtaggaagaaatgtgcttgttgtatacgcgtggagaatacgaagttcggaaaaagatggtgga agatacgctgtatgacatacgctttagtggagcataaatattttgaatcgtttattattacaatgattttggccagtagt ttggcattagccgtagaagacatctacctgaaggacagagaggtcctacaaattattttgaacgtagccgataaattctt caccgtgatcttcatcatagagatgttgatcaaatggattgccttcggttggaagaaatattttacagacgcctggtgct ggctggactttgtcattgtggcggcaacttacaagggatggatagaaataatgaacgatgccatcgatacaacagatatt gacttacaaccaagcaaggaaaacaacgtatattattacatatacttcgtactcttcatcatttttgggtctttcttcac tttaaatttgttcatcggcgttattataaacaacttcaatcaacagaaaaagaagataaagctgattggttggatttttg atctagtaaccaatcagaagtttgatattgccattatgacggtcatcatgttaaacatgctcaccatggcgatggaacat catgatcaggacgagacgttcgacacagttctctattacatcaaccttagcttcatcatcatcttcactattgaatgtgt gctcaaactgataggacttcgccatttttacttcaaatttccatggaatatatttgactttattgttgttgtattgtcca tttttggtgttgccttgtctgatgttatggaggcgtattttgtgtcgccaactcttcttcgtgtcgtgcgtgttttccgt gtcagccgtattttacgactagtcaaatctgcgaaaggcattcgaacacttcttttttcactcgcagtttctattcccgc ccttttcaatattggacttttacttttccttgtgatgtttatctatgctacatttggaatgagcttttttatgggtgtca aacacgttgaaggtatagacgactgtttcaactttgaaacatttggacgtagtattatatatttatttcaaatgtgcaca tccgctggatggcataccgctttagccggtataacgaacgaggaagactgcgatccctcattagataattgtggtaacta cggtattggagtgttttacttagtcagttatctcattataagttttctagtagtggtcaacatgtacatcgctgtcattt tggaaaatttcagccaagctactgaagacgttcaacaagggttgacaacggaagacttcgatgtttattacgaaaagtgg gagaaatttgaccccgatgctacgcaattcataccattagagaaactctcagattttgtagattatttagaagacccact gagacttccgaaaccgaatcattttatgttggtgaaattagatataccaatatgcgaaggcgacaaaatgtattgtcgcg atatattggatgctttaactaaaaatttcttaggtaccgccgaaacaggtgaaataggggagatggctgcaggagacgtt aaggagaaaatatcatataatcctataagctcaacattaaaaagacaaaaggaacactacgcagctagaattatacaaaa ggcgtataggaggtacttaaacgatcggggtgagcggccacctccacccgaatatgaaaaaattataatgagtgatacag ataatactgaatatgctcaggatgctgaatcggcagaaaaagtcggtgaaaaagtcgatgaaaaagtcgacgtagaggag aaagaaacgacgtcaaaacccgatgacgtgactattacgatatcggatcccgacgaaattacgtcatcgacagaaaataa gacagttgagttacgcgcagatagtgacgtagttgtatga |
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Protein
| Protein ID | pfu_aug1.0_8412.1_45855.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8412.1_45855.t1 MKKDSTHLLPDVVVDHGKSDDELSDYHKKETNGDSQKFNHNQICHRHGSKDVDPKDMMVLKDLLDNAEGKRRPSMLSDLS LGEHEEEALRDRLYRKFCSWTCCPCYLKFQKIVALFILDAFMDLFITLCIVMNTAFMAIDHHGKSEELGVVLETGNSVFT WIFAAEAFLKIIALNPVQYVKDGWNCFDILIVMLSFLELILGGSGLSVLRSFRLLRVFKLAKSWPTLNMLISIVAQTMGA LGNLTFVLGIVVFIFAVMGQQLFMPAYELYGKNGTEFADEEPSPRWSFKDFLHSFMIVFRVLCGEWIESMWSCTRVADWP CIPFFLLTMVIGNLVVLNLFLALLLSSFDQVSGGDDTDSEDKEPNKIAEAINRFKRFGSWVKVQIIVCLKMRIRRKSKPP VASSSPKESRIDVNGKPEVISDGHTVIETTALLENYEKDFAWKSQKFFHPFQKYKRKGSQGSISKSGASSSSSPSDEDTK LSLTKVNADGEPEINEVDVTYASYPDDCFCKICRKKCACCIRVENTKFGKRWWKIRCMTYALVEHKYFESFIITMILASS LALAVEDIYLKDREVLQIILNVADKFFTVIFIIEMLIKWIAFGWKKYFTDAWCWLDFVIVAATYKGWIEIMNDAIDTTDI DLQPSKENNVYYYIYFVLFIIFGSFFTLNLFIGVIINNFNQQKKKIKLIGWIFDLVTNQKFDIAIMTVIMLNMLTMAMEH HDQDETFDTVLYYINLSFIIIFTIECVLKLIGLRHFYFKFPWNIFDFIVVVLSIFGVALSDVMEAYFVSPTLLRVVRVFR VSRILRLVKSAKGIRTLLFSLAVSIPALFNIGLLLFLVMFIYATFGMSFFMGVKHVEGIDDCFNFETFGRSIIYLFQMCT SAGWHTALAGITNEEDCDPSLDNCGNYGIGVFYLVSYLIISFLVVVNMYIAVILENFSQATEDVQQGLTTEDFDVYYEKW EKFDPDATQFIPLEKLSDFVDYLEDPLRLPKPNHFMLVKLDIPICEGDKMYCRDILDALTKNFLGTAETGEIGEMAAGDV KEKISYNPISSTLKRQKEHYAARIIQKAYRRYLNDRGERPPPPEYEKIIMSDTDNTEYAQDAESAEKVGEKVDEKVDVEE KETTSKPDDVTITISDPDEITSSTENKTVELRADSDVVV |
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