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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_82652.1_20566
Locus scaffold82652.1 : 1 ... 1566 : +
To GenomeBrowser scaffold82652.1:1..1566
Genes list of scaffold scaffold82652.1
Synonym pfu_aug2.0_9364.1_16376

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_82652.1_20566.t1 1 1 SOUL 2 158 8.3e-40 136.1 6.86636e-44 1.0e-39 135.8

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_82652.1_20566.t1 gi|189516775|ref|XP_001922019.1| 6.0e-28

Transcript
Transcript IDpfu_aug1.0_82652.1_20566.t1
Definition-
>pfu_aug1.0_82652.1_20566.t1
ggctacgaactgcgacgatatgagatgacacaatgggtaactgctagaaccataacaaacaactactcacgacaaatcaa
cagtgaaattttcttctccttgttccgatacatctccgggaataacacagcaggaacaaagattcccatgacggcaccag
ttttaaacatcgtcaccccaggttccaccaacgaacaatcctcggtttacgagatgcatttcatgatcccccataatatg
cagcccttccccccggcacccacggaaccaaccgtctacattacaacgttaccacccatggatgtctatgttaaaacttt
tagtggttttgctgatatggcacaaagcgagcaaatggtgacatcattaaaacattctataaacaatgcatcattgtatg
ataatacactctttatgacggctggatatgacggaccctacacaatagtcaacaggcacaacgaggtgtggctcttcaaa
gcataa

Protein
Protein IDpfu_aug1.0_82652.1_20566.t1
Definition-
>pfu_aug1.0_82652.1_20566.t1
GYELRRYEMTQWVTARTITNNYSRQINSEIFFSLFRYISGNNTAGTKIPMTAPVLNIVTPGSTNEQSSVYEMHFMIPHNM
QPFPPAPTEPTVYITTLPPMDVYVKTFSGFADMAQSEQMVTSLKHSINNASLYDNTLFMTAGYDGPYTIVNRHNEVWLFK
A

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