Gene
| Gene Model ID | pfu_aug1.0_8005.1_53075 |
|---|---|
| Locus | scaffold8005.1 : 11674 ... 20425 : - |
| To GenomeBrowser | scaffold8005.1:11674..20425 |
| Genes list of scaffold | scaffold8005.1 |
| Synonym | pfu_aug2.0_10660.1_03068 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_8005.1_53075.t1 | 2 | 1 | LIM | 73 | 129 | 4.9e-29 | 100.1 | 1.3e-16 | 3.8e-13 | 49.2 |
| pfu_aug1.0_8005.1_53075.t1 | 2 | 2 | LIM | 134 | 190 | 4.9e-29 | 100.1 | 6.0e-19 | 1.8e-15 | 56.7 |
| pfu_aug1.0_8005.1_53075.t1 | 1 | 1 | Homeobox | 209 | 265 | 1.1e-18 | 66.5 | 6.1e-22 | 1.8e-18 | 65.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_8005.1_53075.t1 | gi|91078266|ref|XP_971202.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 3 |
| 8-16cell | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_8005.1_53075.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8005.1_53075.t1 atgaccgttttgaaaatgggcggttccaaattttgtgtaatgctaggctttaaaattaccccgagtattccgtttgtaaa aataaatcgggaacttgttgaggctgtgctaatatttctattttcaaaatatttcaaattactctgtccaggcaatacga ccttaattgagcatttaaaagtgaaattctctttatttcagtctgacggtgacctatgcagtggatgtggtgaccttata actgaccgattcctcctgcacgtgaatggtcaatcatggcacgtgggctgcctacgctgcagtgtgtgtcagatcggtct agagtatcaacagtcgtgttttattaaggaggacgcggtctattgtaaactagactattccagacatttcggcactaaat gttccaagtgtctccggtctatacaggccacagactgggtgaggagagccagggacaatgtctaccacctagcgtgtttt gcctgtgatagctgtaagaggcagttgtccaccggggaagagttcgctctacagggggagagagtgctgtgtaaaacaca ctatgtagaactattggagggagggcccaataaagattcagacagcagtcaaaaatctaaagcaaaacgagtgagaacaa cattcacggaggaacaactacaagttttacaagccaatttccagttagacagcaaccctgatggtcaagatctggaaaga atagcacaaatcacaggcctcagcaaaagagtcactcaagtttggtttcaaaattcccgcgcgcgccaaaagaagcagac acagcatggtccagacgatgatggaagtcccttatcacattctccgcaatctaaacctccgagcccaggacattggctta acggttcagacagtcagaacagtgataatttctctttctcagaatga |
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Protein
| Protein ID | pfu_aug1.0_8005.1_53075.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_8005.1_53075.t1 MTVLKMGGSKFCVMLGFKITPSIPFVKINRELVEAVLIFLFSKYFKLLCPGNTTLIEHLKVKFSLFQSDGDLCSGCGDLI TDRFLLHVNGQSWHVGCLRCSVCQIGLEYQQSCFIKEDAVYCKLDYSRHFGTKCSKCLRSIQATDWVRRARDNVYHLACF ACDSCKRQLSTGEEFALQGERVLCKTHYVELLEGGPNKDSDSSQKSKAKRVRTTFTEEQLQVLQANFQLDSNPDGQDLER IAQITGLSKRVTQVWFQNSRARQKKQTQHGPDDDGSPLSHSPQSKPPSPGHWLNGSDSQNSDNFSFSE |
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