Gene
| Gene Model ID | pfu_aug1.0_7686.1_53016 |
|---|---|
| Locus | scaffold7686.1 : 30983 ... 37985 : - |
| To GenomeBrowser | scaffold7686.1:30983..37985 |
| Genes list of scaffold | scaffold7686.1 |
| Synonym | pfu_aug2.0_1912.1_08640 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7686.1_53016.t1 | 3 | 1 | zf-Di19 | 5 | 57 | 3.3e-08 | 33.5 | 5.6e-05 | 0.056 | 13.5 |
| pfu_aug1.0_7686.1_53016.t1 | 3 | 1 | zf-C2H2_jaz | 5 | 27 | 4.8e-08 | 32.9 | 1.3e-07 | 0.00013 | 22.0 |
| pfu_aug1.0_7686.1_53016.t1 | 5 | 1 | zf-H2C2_2 | 5 | 16 | 7.1e-08 | 32.3 | 0.0014 | 1.3 | 9.4 |
| pfu_aug1.0_7686.1_53016.t1 | 4 | 1 | zf-C2H2 | 6 | 29 | 9.0e-17 | 60.3 | 3.6e-09 | 3.6e-06 | 27.0 |
| pfu_aug1.0_7686.1_53016.t1 | 4 | 1 | zf-C2H2_4 | 6 | 29 | 5.6e-16 | 57.6 | 8.5e-08 | 8.4e-05 | 22.6 |
| pfu_aug1.0_7686.1_53016.t1 | 4 | 1 | zf-met | 6 | 26 | 2.6e-09 | 36.9 | 7.0e-06 | 0.0069 | 16.5 |
| pfu_aug1.0_7686.1_53016.t1 | 5 | 2 | zf-H2C2_2 | 20 | 43 | 7.1e-08 | 32.3 | 2.7e-05 | 0.027 | 14.7 |
| pfu_aug1.0_7686.1_53016.t1 | 3 | 2 | zf-Di19 | 33 | 63 | 3.3e-08 | 33.5 | 0.0012 | 1.2 | 9.3 |
| pfu_aug1.0_7686.1_53016.t1 | 4 | 2 | zf-C2H2 | 35 | 57 | 9.0e-17 | 60.3 | 6.4e-06 | 0.0063 | 16.7 |
| pfu_aug1.0_7686.1_53016.t1 | 4 | 2 | zf-C2H2_4 | 35 | 57 | 5.6e-16 | 57.6 | 1.2e-06 | 0.0012 | 19.0 |
| pfu_aug1.0_7686.1_53016.t1 | 4 | 2 | zf-met | 35 | 53 | 2.6e-09 | 36.9 | 0.3 | 290.0 | 1.8 |
| pfu_aug1.0_7686.1_53016.t1 | 5 | 3 | zf-H2C2_2 | 154 | 175 | 7.1e-08 | 32.3 | 0.00014 | 0.14 | 12.4 |
| pfu_aug1.0_7686.1_53016.t1 | 3 | 3 | zf-Di19 | 164 | 216 | 3.3e-08 | 33.5 | 4.7e-07 | 0.00047 | 20.2 |
| pfu_aug1.0_7686.1_53016.t1 | 4 | 3 | zf-C2H2 | 165 | 188 | 9.0e-17 | 60.3 | 5.1e-08 | 5.0e-05 | 23.3 |
| pfu_aug1.0_7686.1_53016.t1 | 4 | 3 | zf-C2H2_4 | 165 | 188 | 5.6e-16 | 57.6 | 1.6e-07 | 0.00015 | 21.8 |
| pfu_aug1.0_7686.1_53016.t1 | 4 | 3 | zf-met | 165 | 185 | 2.6e-09 | 36.9 | 4.4e-05 | 0.043 | 14.0 |
| pfu_aug1.0_7686.1_53016.t1 | 3 | 2 | zf-C2H2_jaz | 165 | 186 | 4.8e-08 | 32.9 | 2.3e-07 | 0.00022 | 21.2 |
| pfu_aug1.0_7686.1_53016.t1 | 5 | 4 | zf-H2C2_2 | 180 | 203 | 7.1e-08 | 32.3 | 5.5e-05 | 0.055 | 13.7 |
| pfu_aug1.0_7686.1_53016.t1 | 4 | 4 | zf-C2H2 | 194 | 216 | 9.0e-17 | 60.3 | 0.00082 | 0.81 | 10.1 |
| pfu_aug1.0_7686.1_53016.t1 | 4 | 4 | zf-met | 194 | 213 | 2.6e-09 | 36.9 | 7.4e-05 | 0.073 | 13.3 |
| pfu_aug1.0_7686.1_53016.t1 | 4 | 4 | zf-C2H2_4 | 195 | 213 | 5.6e-16 | 57.6 | 0.00087 | 0.86 | 10.0 |
| pfu_aug1.0_7686.1_53016.t1 | 3 | 3 | zf-C2H2_jaz | 195 | 213 | 4.8e-08 | 32.9 | 0.86 | 850.0 | 0.2 |
| pfu_aug1.0_7686.1_53016.t1 | 5 | 5 | zf-H2C2_2 | 208 | 217 | 7.1e-08 | 32.3 | 0.45 | 450.0 | 1.4 |
Transcript
| Transcript ID | pfu_aug1.0_7686.1_53016.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7686.1_53016.t1 atggcacctgctaaatttgaatgcgtaatttgcggcaaatcatttactaaacgcaatagcttaaatcgtcatatccggac gattcatcatagggagtccaccaaatgtgaattttgcggacatactttccctcgaaaagacagttatcttcgccatgtaa tatcacaacaccaacggggtagtggacaagttcgaggagagagcaagacattcaacaaagcaaaggaaaataaatatgaa gagaaatcgcaaccacaaaccgatttttctccctttcaaaacgacaaagaaaaggagtgtgctagtaacgaggaggagaa ggagcaggagcaggagaacgtcaatggaaatttgagaacatttccaaaagatgaaaatggagcgaagatcaaagggaagc atgacgttatacgcaaaaagttcgctaaagcttgtaacgtgcaaatttacgtaggaatacattttaaagtatgtcaaacc gcacctgctgaatttgaatgcgaattttgtggcaagtatttcacaaaacgcaaagttttaaatcgtcatattcggacggt ccatgaggggaagtcgaccacatgtgaaatatgctgtctttccttcagccgtaaagacagttatcttcggcatctaaaat ttaaacatcaacaggatgatggacttgtacgggaagagagtacagacaaagcaaacaaagtaaatgcaaatgacaacgaa gagaaatcggaaacagaaaaatatgattcctcagaaaatgatttagaaatggaatgtatttcggaggaggaggaagagga ggagaaggaggacatcaacgaaaattttgggaactattcaatagaagaaaatggcaagtcattatttcaatattga |
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Protein
| Protein ID | pfu_aug1.0_7686.1_53016.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7686.1_53016.t1 MAPAKFECVICGKSFTKRNSLNRHIRTIHHRESTKCEFCGHTFPRKDSYLRHVISQHQRGSGQVRGESKTFNKAKENKYE EKSQPQTDFSPFQNDKEKECASNEEEKEQEQENVNGNLRTFPKDENGAKIKGKHDVIRKKFAKACNVQIYVGIHFKVCQT APAEFECEFCGKYFTKRKVLNRHIRTVHEGKSTTCEICCLSFSRKDSYLRHLKFKHQQDDGLVREESTDKANKVNANDNE EKSETEKYDSSENDLEMECISEEEEEEEKEDINENFGNYSIEENGKSLFQY |
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