Gene
| Gene Model ID | pfu_aug1.0_7573.1_45689 |
|---|---|
| Locus | scaffold7573.1 : 19241 ... 23675 : - |
| To GenomeBrowser | scaffold7573.1:19241..23675 |
| Genes list of scaffold | scaffold7573.1 |
| Synonym | pfu_aug2.0_1414.1_15026 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_7573.1_45689.t1 | 1 | 1 | 7TM_GPCR_Srsx | 83 | 184 | 6.4e-06 | 25.5 | 2.3e-09 | 8.4e-06 | 25.1 |
| pfu_aug1.0_7573.1_45689.t1 | 1 | 1 | 7tm_1 | 88 | 184 | 3.2e-24 | 85.4 | 1.1e-27 | 4.2e-24 | 85.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7573.1_45689.t1 | gi|260810651|ref|XP_002600070.1| | hypothetical protein BRAFLDRAFT_79674 [Branchiostoma floridae] | 2.0e-34 |
Transcript
| Transcript ID | pfu_aug1.0_7573.1_45689.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7573.1_45689.t1 atgtctaaattgaaatacagtgatgttggcaacgtgtcatctacaacgaatgacgatgatacttccagacatccagggat tggattttcacaattcatcaacattggaaattctacttttgctactggagcaaggatgatatcgacatcatccggaaatg aaactatagaaccaccgaacgtgcctattatagagatttggactcctgacgttatccagcgagtcgcaactataattgtg ataatgcttttatcgttggttggtaacattgttattattcttgttcttagttgtagcagatacaggaagaggaatcgcgt gaatatattcattattaatctatccattggagatttggcggtgtgttttataacaatgacgactgaaattttatttgtag ctttcggggaatgggttcttggagaagcattatgtaaaattctgacctacatacaaattgtgactctggctagtacgact ttcatattaacgtcgatggcacttgatagatacatagcgatatgtaaaccgctgagattccgatccacgctccatcgcgc tcgaaaatga |
|
Protein
| Protein ID | pfu_aug1.0_7573.1_45689.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7573.1_45689.t1 MSKLKYSDVGNVSSTTNDDDTSRHPGIGFSQFINIGNSTFATGARMISTSSGNETIEPPNVPIIEIWTPDVIQRVATIIV IMLLSLVGNIVIILVLSCSRYRKRNRVNIFIINLSIGDLAVCFITMTTEILFVAFGEWVLGEALCKILTYIQIVTLASTT FILTSMALDRYIAICKPLRFRSTLHRARK |
|