Gene
| Gene Model ID | pfu_aug1.0_75331.1_13169 |
|---|---|
| Locus | scaffold75331.1 : 88 ... 3591 : + |
| To GenomeBrowser | scaffold75331.1:88..3591 |
| Genes list of scaffold | scaffold75331.1 |
| Synonym | pfu_aug2.0_105.1_16921 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_75331.1_13169.t1 | 1 | 1 | ATP_bind_1 | 6 | 201 | 0.0 | 247.3 | 0.0 | 0.0 | 247.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_75331.1_13169.t1 | gi|260823374|ref|XP_002604158.1| | hypothetical protein BRAFLDRAFT_71542 [Branchiostoma floridae] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_75331.1_13169.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_75331.1_13169.t1 atgtttggtcaggttgtgataggtcccccaggatcagggaagaccacatactgccatggaatgtctcagttcctgccggc tctcggtcgtgatgtcgccgtggtgaacttagatccagccaatgatatgctaccatacaaatgtgaccttgacatatcaa ccttgataaccttggaagatgtcatgacatccctaaagcttggccctaatggaggactgatatactgtatggaatttcta gagaagaacatggattggttccagagtgaattacagaagctaagagagaagaaaaagtatttattatttgactttcctgg tcaagtggaactgtacacacatcataactgtgtgcggaacattttacgtcagctacagaagtgggactacaggttagcag ccgtacatctcgtagactcacattactgtagcgatcctggcaagtttattgccgtccttcttacatcattgtctactatg cttcaaatggagttaccacatgtcaacgttttatcaaagtgtgatctgatagagaagtttggaaagcttcagtttaactt ggatttttatacggaggttttggaccttaattatcttcttgacaacattcag |
|
Protein
| Protein ID | pfu_aug1.0_75331.1_13169.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_75331.1_13169.t1 MFGQVVIGPPGSGKTTYCHGMSQFLPALGRDVAVVNLDPANDMLPYKCDLDISTLITLEDVMTSLKLGPNGGLIYCMEFL EKNMDWFQSELQKLREKKKYLLFDFPGQVELYTHHNCVRNILRQLQKWDYRLAAVHLVDSHYCSDPGKFIAVLLTSLSTM LQMELPHVNVLSKCDLIEKFGKLQFNLDFYTEVLDLNYLLDNIQ |
|