Gene
| Gene Model ID | pfu_aug1.0_7448.1_52961 |
|---|---|
| Locus | scaffold7448.1 : 29536 ... 47134 : + |
| To GenomeBrowser | scaffold7448.1:29536..47134 |
| Genes list of scaffold | scaffold7448.1 |
| Synonym | pfu_aug2.0_1.1_03323 |
Manual annotation
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_7448.1_52961.t1 | gi|118404816|ref|NP_001072580.1| | protein Smaug homolog 1 [Xenopus (Silurana) tropicalis] | 5.0e-40 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_7448.1_52961.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7448.1_52961.t1 atgaagtccaacaacatgtttcgagaccagatgaacatggtcacagaatggtttgagaactggaacgagtgtgagaagac ggtagcgttatattggctgctaaagcgagtgtcgagcacacagtgtaagttcatagctcaggtcctggagcagatggact gtacagacttagaagggatcacagaggaggctaatgatccaaatttcatcaacaagctatgcacagagagtaaagatcag gcgatagacaaagtcttagctcacctaccattgttacgtgtcggtaacaaaaaggcaaaaactgagtatgtgggactggt accccaacttctgtcatattctatcgaaaacggtgcgtacatagaggaatgcaaccaacttctctcctactccattattc accctgcgctaactagcgacgaacgtgctcatttcaaatggtggtataaacaattggaagaaagatttacgtcgggattt aatggtgtgcaaacacaaacaaaaccaccacaagaaaatttgacgaactatagcagccttacatcagagcagaatgtgca gcgtaatttcgaatccaaccaaacgaatgttggaagtggtagttctttcaccagctacagagacaaagttctgcagccac ctcctggatgtacccaggttaagcaaacaggaggcccacttgggcactcagactctcatggtaaccagcctatctctttg tgctatgaaaatggtttacacgacagtataaactataacccagtacctagtgctcagcatttaccgttacactcgacact ctcagcgccacctaacatgggacatatcgtgccttcatcacaaccacaagagtcaaatatcaagggctacaaccattga |
|
Protein
| Protein ID | pfu_aug1.0_7448.1_52961.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_7448.1_52961.t1 MKSNNMFRDQMNMVTEWFENWNECEKTVALYWLLKRVSSTQCKFIAQVLEQMDCTDLEGITEEANDPNFINKLCTESKDQ AIDKVLAHLPLLRVGNKKAKTEYVGLVPQLLSYSIENGAYIEECNQLLSYSIIHPALTSDERAHFKWWYKQLEERFTSGF NGVQTQTKPPQENLTNYSSLTSEQNVQRNFESNQTNVGSGSSFTSYRDKVLQPPPGCTQVKQTGGPLGHSDSHGNQPISL CYENGLHDSINYNPVPSAQHLPLHSTLSAPPNMGHIVPSSQPQESNIKGYNH |
|