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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_7.1_14679
Locus scaffold7.1 : 623661 ... 635810 : -
To GenomeBrowser scaffold7.1:623661..635810
Genes list of scaffold scaffold7.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_7.1_14679.t1 1 1 Glyco_hydro_18 25 316 0.0 244.2 0.0 0.0 243.9

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_7.1_14679.t1 gi|321477336|gb|EFX88295.1| hypothetical protein DAPPUDRAFT_311586 [Daphnia pulex] 0.0

Transcript
Transcript IDpfu_aug1.0_7.1_14679.t1
Definition-
>pfu_aug1.0_7.1_14679.t1
atgacaaccttgggaataagattccttcttttggcagccactctgctgttctttactgaagccagagatttcaaacgagt
atgttactttaccaactggtcacacaaaagagcgcataatccaactcgatacgatatcactgacattgatccaagcctct
gcactcacatcaattatgcctttgccggtgtagacgaaggcaacttgactctcattcacacaaaccctgatgacgaaaat
tctactgctaacaaaaaagggcgattctacgaatttactgctttgaaaaagaacaatccaagcttaaagatgcttctgtc
agtcggtggattgaaaacgaataatattttgtcttacattgtttcctcaaatgtgtccatgaaaacatttgccagaaatt
gcaggagttatttggatcaacgtgggtttgacggacttgacgtagattgggaatttccgaatgcacaacacaaggatgga
ttcactcaacttcttaaggccttatatgaagaattcaaaaacacgtcatactgtgacagcaaacagtttctcttgtcaat
agccgccgctgctggaaaagacacgatagatgcctcatacaacgtgccagagattgtgaagtatgtcgatttcatcaacg
tcatgacgtactcatactatggagactggagtaagcagactgggttttacagtggactttatagctatggagacccaaca
tctcttgcctacaaactttcaacagactggactatgaatagatatattgaattaggggctccatcccagatgttagtagt
tggactgtcggcagttgcctctgggtttgaactagccgatgcggccaaacatggagttggagctaaaatcaaacatggaa
tagcacctgacaaggttataaacgaacaaggaattagaagctatcaaggaatttgtttttatacacatacgaaaaagaat
tcatgcaaaatcaagaaattgaaaattgacgaattgaaatgtttcaacggcacctctaggtatcttgatgatattttgaa
tattgataacccacattttgaccataacaaaaatcaaatttatcctccagagttaacattgaacaaagcaaacacaaatg
atatagctacaccatttttggatcttgatatcaaaatcaataccggagaaatgcagacaaaagagaggattttggcttcc
acatag

Protein
Protein IDpfu_aug1.0_7.1_14679.t1
Definition-
>pfu_aug1.0_7.1_14679.t1
MTTLGIRFLLLAATLLFFTEARDFKRVCYFTNWSHKRAHNPTRYDITDIDPSLCTHINYAFAGVDEGNLTLIHTNPDDEN
STANKKGRFYEFTALKKNNPSLKMLLSVGGLKTNNILSYIVSSNVSMKTFARNCRSYLDQRGFDGLDVDWEFPNAQHKDG
FTQLLKALYEEFKNTSYCDSKQFLLSIAAAAGKDTIDASYNVPEIVKYVDFINVMTYSYYGDWSKQTGFYSGLYSYGDPT
SLAYKLSTDWTMNRYIELGAPSQMLVVGLSAVASGFELADAAKHGVGAKIKHGIAPDKVINEQGIRSYQGICFYTHTKKN
SCKIKKLKIDELKCFNGTSRYLDDILNIDNPHFDHNKNQIYPPELTLNKANTNDIATPFLDLDIKINTGEMQTKERILAS
T

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