Gene
| Gene Model ID | pfu_aug1.0_6844.1_09446 |
|---|---|
| Locus | scaffold6844.1 : 1 ... 27495 : - |
| To GenomeBrowser | scaffold6844.1:1..27495 |
| Genes list of scaffold | scaffold6844.1 |
| Synonym | pfu_aug2.0_429.1_30752 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6844.1_09446.t1 | 4 | 1 | fn3 | 80 | 157 | 1.69557e-43 | 146.6 | 3.6e-08 | 0.00013 | 21.9 |
| pfu_aug1.0_6844.1_09446.t1 | 4 | 2 | fn3 | 179 | 260 | 1.69557e-43 | 146.6 | 5.2e-16 | 1.9e-12 | 47.1 |
| pfu_aug1.0_6844.1_09446.t1 | 4 | 3 | fn3 | 274 | 353 | 1.69557e-43 | 146.6 | 3.9e-19 | 1.5e-15 | 57.1 |
| pfu_aug1.0_6844.1_09446.t1 | 4 | 4 | fn3 | 383 | 454 | 1.69557e-43 | 146.6 | 1.1e-07 | 0.00039 | 20.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6844.1_09446.t1 | gi|328706034|ref|XP_003242978.1| | 6.0e-31 |
Transcript
| Transcript ID | pfu_aug1.0_6844.1_09446.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6844.1_09446.t1 atgaaccccatcggaaagctctggatcaattatgacgtcacaaaagaaacggcgatattgacgcgtttttcgcaagaacc tgcacctgttgacctatcctatacgaactttgttaacgatgctgatatgagattagatgctatgaagaacgtcacagaac gacttgttctgcttatgaatacatgtgcacgtggacttgaacctccttcgatcccacggaacataatggtccaatctgag actgtggacaacacatcaaacatctttgtcagctgggacccaccaatgttgacgggaatgcctcaggttgacgataatct tcactacaaagtttatttctccccggtagatgagtatggacagcctacaggagggcaaatgctatttagaatctgtgacg caaattcaacgcaagcctccgtgacagacctctccccaaggtcgtattatagtataagaatagcagcggcacattgcctg tctgttgaatctgaaggtgatccaaccctcgtcaggacccttgatatcataccatccgctcctttgaacgtaagaatcga gggtaagaaagccaatgccatcgctgtcggctgggatcctcctgcagtgatgggaacactcaccaattataccatctatg tcggcgaggaatcaggcccggtaactacggtggcagttgatccatccattactacttacgctatttatgacctttatgaa ggaacgatgtataacgttcaggtgtcggcatcatccgacaatggtgaaagtcccaaaagtcaacctatacaagtgataac tgatgcttatgtaccaatggcaccaagaaacttaagggcgatcgaccataacttgacgtcagtgaccttaaggtgggacc ccccgactgctggacccggaatgattagaggttacagagtcaatttcactacagacacaggatttgataactaccaggag gtgctgacgtcaggtccgtcagatactcaagtcactattacagggctcgctccggccacgttgtactacttccaagttta tgctcgtactatgaagaggctcggcatggggagtgcagttatattgaatatgacaaaagcagatgttccatctaagccaa tgtcggttatgcatcagttggtggacaatggcctacaaacaatccagctgtcatggcaaccaccgaataacacgtatggc ccgatactcaagtatgttcttcactggggtgtcaggggcggagctactagaaaggaaaatctaactgcttacattctgac ttggtcctcagatttactagatgataataccactcacgatttcaagctatctgctgtcaacgaactcggcgaaggagaac caacttatctcagcatccgcaccaaagccaaacaacggcagatttttaagtatgctttacgtcaaatccaatatggccga taa |
|
Protein
| Protein ID | pfu_aug1.0_6844.1_09446.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6844.1_09446.t1 MNPIGKLWINYDVTKETAILTRFSQEPAPVDLSYTNFVNDADMRLDAMKNVTERLVLLMNTCARGLEPPSIPRNIMVQSE TVDNTSNIFVSWDPPMLTGMPQVDDNLHYKVYFSPVDEYGQPTGGQMLFRICDANSTQASVTDLSPRSYYSIRIAAAHCL SVESEGDPTLVRTLDIIPSAPLNVRIEGKKANAIAVGWDPPAVMGTLTNYTIYVGEESGPVTTVAVDPSITTYAIYDLYE GTMYNVQVSASSDNGESPKSQPIQVITDAYVPMAPRNLRAIDHNLTSVTLRWDPPTAGPGMIRGYRVNFTTDTGFDNYQE VLTSGPSDTQVTITGLAPATLYYFQVYARTMKRLGMGSAVILNMTKADVPSKPMSVMHQLVDNGLQTIQLSWQPPNNTYG PILKYVLHWGVRGGATRKENLTAYILTWSSDLLDDNTTHDFKLSAVNELGEGEPTYLSIRTKAKQRQIFKYALRQIQYGR |
|