Gene
| Gene Model ID | pfu_aug1.0_6773.1_02302 |
|---|---|
| Locus | scaffold6773.1 : 19930 ... 39755 : - |
| To GenomeBrowser | scaffold6773.1:19930..39755 |
| Genes list of scaffold | scaffold6773.1 |
| Synonym | pfu_aug2.0_531.1_04297 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6773.1_02302.t1 | 3 | 1 | Pkinase | 3 | 109 | 2.2e-19 | 69.6 | 7.3e-23 | 5.4e-19 | 68.3 |
| pfu_aug1.0_6773.1_02302.t1 | 2 | 1 | Pkinase_Tyr | 3 | 85 | 6.1e-12 | 45.1 | 1.9e-15 | 1.4e-11 | 44.0 |
| pfu_aug1.0_6773.1_02302.t1 | 3 | 2 | Pkinase | 355 | 405 | 2.2e-19 | 69.6 | 0.53 | 3900.0 | -3.3 |
| pfu_aug1.0_6773.1_02302.t1 | 2 | 2 | Pkinase_Tyr | 455 | 476 | 6.1e-12 | 45.1 | 0.6 | 4400.0 | -3.6 |
| pfu_aug1.0_6773.1_02302.t1 | 3 | 3 | Pkinase | 456 | 477 | 2.2e-19 | 69.6 | 0.42 | 3100.0 | -3.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6773.1_02302.t1 | gi|344266315|ref|XP_003405226.1| | PREDICTED: serine/threonine-protein kinase TBK1 [Loxodonta africana] | 2.0e-40 |
Transcript
| Transcript ID | pfu_aug1.0_6773.1_02302.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6773.1_02302.t1 atgaatgtactggtaatggagtattgtaatggcggaagtttgtacgccatgttacaggaaccggaatacaaacatggact tccggatcaggaatttctcttcttgatacgtgatatatgtagtggattgcgtgtcttacaatcccaaaacatagtacatc gtgacatcaaacccgggaatatactacgtcatatcgacagaggaagatctgagtataagctgtcagattttgggtcatcg ctgatgtcggacaaacataatgaggatgatataggatttatgtccatggcagggaccgaggaatacctgcatcccgtgtt atacgagtgtgcttttgtgactagaaaggggcaagtgaggacgacagctaatgtcgagctatggtatcaaatgatatcaa agaaacccagaaataagatatccggagtccaagagacgtcgaatggacgattcctctggagcgataatttaccacgagac tgcaacttatcagaaatccaggaatgtactgtgatacacgtgttgtacacggtgaaatgtgatacatacacaatctacct cgacaaacacagcagtttttcatatttacgggagcgcctggcggagaccactgaccagccctcctgtcgccatgtttact tttacaacaacagacgactgatttgtgaggacaacagagtgtcttcattgccttgtacgtccagagaaagtcctataatc ctggcccttaaagacaatcaggacgcttttgacgatattaacattagtttagatgatctaataagtttccatggagatgt tgcttttcacaaggactgtaagactgctcttaggattctaagcaacatctacatgataacaaattccatggactcaatga aaacgagtttgagagtattacagaattttgaaaaaaatcatagaccctttggaatgaatttgacgttttcaataaaaaat tatttccagggacactgtatctttaaattaagatttatttgcgagattcgtgttaggattgggtctgcagcagagcatgt tgagagtgtaagaaattcatctcacaaacctccccaacaaaactcaaacagggtatccgagtcacagtgtttcagtattt gtgagggtattgtcgatcagtgtaagaatatatggcattgtataaagtttaggacaaaattaagccgaccctcaactttg gactgtctcaatcattccaatgacaaatgtcaacttgaatcgttatactctaccattcatcaacactgggcattactgag ggaacaagtcagtcaatactcagacacgtacacgcagtttgtcagatggtctttggacataacagagaatattgacagta tcaacataatggtccgcgagacagaggagctccgacgacaattccatgaaaatttagtcacgttttctgtttattcgctc acggagaaaatgaatgatgatttaacagtagaattttctgatatgagtcaaaacgaatttgtttacgaataa |
|
Protein
| Protein ID | pfu_aug1.0_6773.1_02302.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6773.1_02302.t1 MNVLVMEYCNGGSLYAMLQEPEYKHGLPDQEFLFLIRDICSGLRVLQSQNIVHRDIKPGNILRHIDRGRSEYKLSDFGSS LMSDKHNEDDIGFMSMAGTEEYLHPVLYECAFVTRKGQVRTTANVELWYQMISKKPRNKISGVQETSNGRFLWSDNLPRD CNLSEIQECTVIHVLYTVKCDTYTIYLDKHSSFSYLRERLAETTDQPSCRHVYFYNNRRLICEDNRVSSLPCTSRESPII LALKDNQDAFDDINISLDDLISFHGDVAFHKDCKTALRILSNIYMITNSMDSMKTSLRVLQNFEKNHRPFGMNLTFSIKN YFQGHCIFKLRFICEIRVRIGSAAEHVESVRNSSHKPPQQNSNRVSESQCFSICEGIVDQCKNIWHCIKFRTKLSRPSTL DCLNHSNDKCQLESLYSTIHQHWALLREQVSQYSDTYTQFVRWSLDITENIDSINIMVRETEELRRQFHENLVTFSVYSL TEKMNDDLTVEFSDMSQNEFVYE |
|