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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_6665.1_31261
Locus scaffold6665.1 : 856 ... 9786 : +
To GenomeBrowser scaffold6665.1:856..9786
Genes list of scaffold scaffold6665.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_6665.1_31261.t1 1 1 E1_DerP2_DerF2 89 207 1.4e-09 38.3 3.1e-13 2.3e-09 37.6

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues
mantle 2

Transcript
Transcript IDpfu_aug1.0_6665.1_31261.t1
Definition-
>pfu_aug1.0_6665.1_31261.t1
atgcacgagatcaaagcacttcttctagtattttgtaccatagaattcacaacatcgttggattttgaattccttgcccc
tcaagatcttggtgggaaaagtaaatcaaatgtaaatgaatttattcgtcaagcgggaacaccctttatcaagaaaccgc
ttctcctgagtcagaactcaaaataccatagatatgcagctgaattattgaaaaccttcaaacctgttccagtacattta
aaagatgattcggactggacgcatgcgaataactgtggaccagcccattctaagatagagttaaaatggtcaccaaaagt
aattaagtctggtggtaaactaaaggtggagttaaatatggtaactcctgtaaggtacatgaatggtacagcaagggcag
tcctttatatccttggagcgaaagagcctatgttaaccctggagcaggacttctcttgccaatatatcaaaggacttgta
ccttatatcacatgtcctatccaaaaaggacttcctattaaacagagatatgagacagatcaattaacaaacataccttt
gggaaaatacgtaatgaaagtcagcgtttttaatgagaaaggacaactgtttgcttgtgtaattgggacgttattcctca
gtgattga

Protein
Protein IDpfu_aug1.0_6665.1_31261.t1
Definition-
>pfu_aug1.0_6665.1_31261.t1
MHEIKALLLVFCTIEFTTSLDFEFLAPQDLGGKSKSNVNEFIRQAGTPFIKKPLLLSQNSKYHRYAAELLKTFKPVPVHL
KDDSDWTHANNCGPAHSKIELKWSPKVIKSGGKLKVELNMVTPVRYMNGTARAVLYILGAKEPMLTLEQDFSCQYIKGLV
PYITCPIQKGLPIKQRYETDQLTNIPLGKYVMKVSVFNEKGQLFACVIGTLFLSD

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