Gene
| Gene Model ID | pfu_aug1.0_6497.1_45448 |
|---|---|
| Locus | scaffold6497.1 : 53488 ... 58855 : - |
| To GenomeBrowser | scaffold6497.1:53488..58855 |
| Genes list of scaffold | scaffold6497.1 |
| Synonym | pfu_aug2.0_241.1_03857 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6497.1_45448.t2 | 2 | 1 | Homeobox | 63 | 115 | 2.9e-21 | 74.8 | 1.8e-11 | 2.7e-08 | 33.2 |
| pfu_aug1.0_6497.1_45448.t2 | 2 | 1 | Homeobox_KN | 76 | 115 | 2.5e-22 | 78.2 | 8.0e-11 | 1.2e-07 | 31.3 |
| pfu_aug1.0_6497.1_45448.t2 | 2 | 1 | Homez | 90 | 113 | 7.3e-11 | 40.9 | 6.8e-06 | 0.01 | 14.8 |
| pfu_aug1.0_6497.1_45448.t2 | 2 | 2 | Homeobox | 151 | 204 | 2.9e-21 | 74.8 | 2.0e-14 | 2.9e-11 | 42.8 |
| pfu_aug1.0_6497.1_45448.t2 | 2 | 2 | Homeobox_KN | 164 | 203 | 2.5e-22 | 78.2 | 1.1e-14 | 1.6e-11 | 43.7 |
| pfu_aug1.0_6497.1_45448.t2 | 2 | 2 | Homez | 180 | 204 | 7.3e-11 | 40.9 | 1.2e-08 | 1.8e-05 | 23.6 |
Transcript
| Transcript ID | pfu_aug1.0_6497.1_45448.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6497.1_45448.t1 atgacagtggaacattcttacaattcaaatgacatggaaacatgggatgaggaaagtataacagaatgtgacgtagacaa ggaaaatgcttatataactagtggtaaaagatcattaagtgatgagggagatgctaaaaataaacgtcaaaagaaagagg agattacgagagtacggggtcgtagcaggcagcttacaagtcaccagactgacgtccttagtaattggtacaaaatacac atcagatatccgtatccatcagatctggaggtacagcaactgtcagaggtgacggggctcaagcagcaacaagtcaagaa atggatggcaaataaacgtgtgcgaaacttcaacactctgtcaatcagtgggaaccaacatcctatcaagttcaaattca aaggaaatcgtgaaagtgatgctgtaaagaatactgtaaaaccaaattatcagcagctgaaccccgaatctcgtaaaata ctcaacgagtggtacaacgaccattctgatcatccgtaccctgataacgaagcaaagcaaacactagcagagaaagctgg aatatcagaggaacaagtgaaatcatggtttgctaataaaagaagtcgtgcacagaacacaaaacgacaagtgccaaatt atttcatcaagaagttccctgagtatgcatctcatgtacatatggtcagtgtaggtcgtgaattagcacgcaaagctaaa agacaaaatacagaggctttgaatgccatccccggtgtatatcaatactga |
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| Transcript ID | pfu_aug1.0_6497.1_45448.t2 |
| Definition | - |
>pfu_aug1.0_6497.1_45448.t2 atgacagtggaacattcttacaattcaaatgacatggaaacatgggatgaggaaagtataacagaatgtgacgtagacaa ggaaaatgcttatataactagtggtaaaagatcattaagtgatgagggagatgctaaaaataaacgtcaaaagaaagagg agattacgagagtacggggtcgtagcaggcagcttacaagtcaccagactgacgtccttagtaattggtacaaaatacac atcagatatccgtatccatcagatctggaggtacagcaactgtcagaggtgacggggctcaagcagcaacaagtcaagaa atggatggcaaataaacgtgtgcgaaacttcaacactctgtcaatcagtgggaaccaacatcctatcaagttcaaattca aaggaaatcgtgaaagtgatgctgtaaagaatactgtaaaaccaaattatcagcagctgaaccccgaatctcgtaaaata ctcaacgagtggtacaacgaccattctgatcatccgtaccctgataacgaagcaaagcaaacactagcagagaaagctgg aatatcagaggaacaagtgaaatcatggtttgctaataaaagaagtcgtgcacagaacacaaaacgacaagtgccaaatt atttcatcaagaagttccctgagtatgcatctcatgtacatatggtcagtgtaggtcgtgaattagcacgcaaagctaaa agacaaaatacagaggctttgaatgccatccccggtgtatatcaatactga |
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Protein
| Protein ID | pfu_aug1.0_6497.1_45448.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6497.1_45448.t1 MTVEHSYNSNDMETWDEESITECDVDKENAYITSGKRSLSDEGDAKNKRQKKEEITRVRGRSRQLTSHQTDVLSNWYKIH IRYPYPSDLEVQQLSEVTGLKQQQVKKWMANKRVRNFNTLSISGNQHPIKFKFKGNRESDAVKNTVKPNYQQLNPESRKI LNEWYNDHSDHPYPDNEAKQTLAEKAGISEEQVKSWFANKRSRAQNTKRQVPNYFIKKFPEYASHVHMVSVGRELARKAK RQNTEALNAIPGVYQY |
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| Protein ID | pfu_aug1.0_6497.1_45448.t2 |
| Definition | - |
>pfu_aug1.0_6497.1_45448.t2 MTVEHSYNSNDMETWDEESITECDVDKENAYITSGKRSLSDEGDAKNKRQKKEEITRVRGRSRQLTSHQTDVLSNWYKIH IRYPYPSDLEVQQLSEVTGLKQQQVKKWMANKRVRNFNTLSISGNQHPIKFKFKGNRESDAVKNTVKPNYQQLNPESRKI LNEWYNDHSDHPYPDNEAKQTLAEKAGISEEQVKSWFANKRSRAQNTKRQVPNYFIKKFPEYASHVHMVSVGRELARKAK RQNTEALNAIPGVYQY |
|