Gene
| Gene Model ID | pfu_aug1.0_6497.1_45446 |
|---|---|
| Locus | scaffold6497.1 : 20282 ... 32245 : - |
| To GenomeBrowser | scaffold6497.1:20282..32245 |
| Genes list of scaffold | scaffold6497.1 |
| Synonym | pfu_aug2.0_241.1_03854 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6497.1_45446.t1 | 1 | 1 | Claudin_2 | 20 | 246 | 1.0e-14 | 54.6 | 3.0e-18 | 1.5e-14 | 54.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6497.1_45446.t1 | gi|328721796|ref|XP_003247407.1| | PREDICTED: uncharacterized protein LOC100570186 [Acyrthosiphon pisum] | 2.0e-19 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_6497.1_45446.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6497.1_45446.t1 atgacgtcaccgctcgtgattttagtcgccagttcggtggttgtgggtgtggtggggagtatatttattttactagcaat atctgtgaactcctgggaggagacggactacgatgacactcagttcacgcaatattacaccaataactctgacgacacca tacaggtgacgccaagggcgtccaaaaatgactatattttatacaagtaccgtgtgtcgtcgtcggacgcttggcagaca tactttctttattatgagtacggaggagcttggcgactttgtgacacacttagcgattcagcgcggtcacagatgagtgc acagggagtaacacgtgatgaatgctacaacttcgtatcggagtacgacgaggaatctactacgctagaggaggacggaa agtcaatagcaaggttacagaattctggtgcgtcttgtttcatcgtgagtataattgatctcgtggccgctgccggcgtg ggagtcatcacattgactcaaaaacaagtggcagctggaatggtaactggcgtcctttactgtatggccagcttattcac agtgtttggattgatcatatttcacgttaaacatcattatgagaagtacaactgtcagaatttgtatccagtgccaccat ctatttgtaattcggcgcgaactgtgacgttgctatgggcggtgcctgttgcttgggttggcgtagtaatctgcctcgtt gccagtgtcttatggctgctcctcacaagggctctcagagtaatcaaagcaaaaacgatgttgtga |
|
Protein
| Protein ID | pfu_aug1.0_6497.1_45446.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6497.1_45446.t1 MTSPLVILVASSVVVGVVGSIFILLAISVNSWEETDYDDTQFTQYYTNNSDDTIQVTPRASKNDYILYKYRVSSSDAWQT YFLYYEYGGAWRLCDTLSDSARSQMSAQGVTRDECYNFVSEYDEESTTLEEDGKSIARLQNSGASCFIVSIIDLVAAAGV GVITLTQKQVAAGMVTGVLYCMASLFTVFGLIIFHVKHHYEKYNCQNLYPVPPSICNSARTVTLLWAVPVAWVGVVICLV ASVLWLLLTRALRVIKAKTML |
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