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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_6331.1_59998
Locus scaffold6331.1 : 19909 ... 32155 : -
To GenomeBrowser scaffold6331.1:19909..32155
Genes list of scaffold scaffold6331.1
Synonym pfu_aug2.0_1.1_03371

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_6331.1_59998.t1 2 1 PFK 4 43 9.4e-31 106.8 1.2e-09 9.3e-06 24.7
pfu_aug1.0_6331.1_59998.t1 2 2 PFK 42 179 9.4e-31 106.8 4.3e-27 3.2e-23 82.0

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_6331.1_59998.t1 gi|170045475|ref|XP_001850333.1| 6-phosphofructokinase [Culex quinquefasciatus] 0.0

Transcript
Transcript IDpfu_aug1.0_6331.1_59998.t1
Definition-
>pfu_aug1.0_6331.1_59998.t1
atgaatattggtgccccggcatgcggtgccaacgccgctgtacggtccttcgtgagactggcgctaactcatggctacac
cgttcttggtatacacgactcctttgatggtcttatttacagtaatatttgtgatcgtatcaaacagtcggccacaggca
ccaaacgtcgggtatttattgtggagacaatgggtggatactgtggttacctagcaaccatgagtgggctggcaggtggc
gctgatgctgcttatatatttgaagaagagatgacaattacaaatcttagagatgatgtattccatttaaaagacaagat
agttaatgctggagtgcagagagggttgattctaaggaatgagaatgccaatcaaaactacagtacagattttgtacata
atctgttttctgaggagggtaaaggagtgtttacatgccgtaagaatgtgctgggtcatatgcagcagggtggagttcct
actccgtttgatagaaactacggcacaaaaatggccgctaaagctgtggaatatatggcgacccttataccagaaagtac
agataaggccagtaagtaa

Protein
Protein IDpfu_aug1.0_6331.1_59998.t1
Definition-
>pfu_aug1.0_6331.1_59998.t1
MNIGAPACGANAAVRSFVRLALTHGYTVLGIHDSFDGLIYSNICDRIKQSATGTKRRVFIVETMGGYCGYLATMSGLAGG
ADAAYIFEEEMTITNLRDDVFHLKDKIVNAGVQRGLILRNENANQNYSTDFVHNLFSEEGKGVFTCRKNVLGHMQQGGVP
TPFDRNYGTKMAAKAVEYMATLIPESTDKASK

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