Gene
| Gene Model ID | pfu_aug1.0_6248.1_02195 |
|---|---|
| Locus | scaffold6248.1 : 118232 ... 138655 : - |
| To GenomeBrowser | scaffold6248.1:118232..138655 |
| Genes list of scaffold | scaffold6248.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6248.1_02195.t1 | 1 | 1 | Pkinase | 29 | 284 | 0.0 | 229.2 | 0.0 | 0.0 | 227.7 |
| pfu_aug1.0_6248.1_02195.t1 | 1 | 1 | Pkinase_Tyr | 30 | 278 | 0.0 | 160.8 | 0.0 | 0.0 | 159.6 |
| pfu_aug1.0_6248.1_02195.t1 | 7 | 1 | zf-H2C2_2 | 425 | 437 | 7.2e-36 | 120.7 | 0.001 | 1.2 | 9.5 |
| pfu_aug1.0_6248.1_02195.t1 | 7 | 1 | zf-C2H2_6 | 426 | 449 | 3.5e-10 | 39.4 | 0.00058 | 0.72 | 9.8 |
| pfu_aug1.0_6248.1_02195.t1 | 8 | 1 | zf-met | 427 | 447 | 1.4e-09 | 37.8 | 0.00092 | 1.1 | 9.5 |
| pfu_aug1.0_6248.1_02195.t1 | 8 | 1 | zf-C2H2 | 427 | 449 | 3.7e-30 | 102.4 | 1.4e-06 | 0.0018 | 18.5 |
| pfu_aug1.0_6248.1_02195.t1 | 8 | 1 | zf-C2H2_4 | 427 | 449 | 1.3e-23 | 81.5 | 0.00024 | 0.29 | 11.5 |
| pfu_aug1.0_6248.1_02195.t1 | 8 | 1 | zf-C2H2_jaz | 427 | 447 | 4.2e-10 | 39.4 | 0.0001 | 0.13 | 12.4 |
| pfu_aug1.0_6248.1_02195.t1 | 8 | 2 | zf-C2H2 | 455 | 477 | 3.7e-30 | 102.4 | 8.5e-06 | 0.011 | 16.0 |
| pfu_aug1.0_6248.1_02195.t1 | 8 | 2 | zf-C2H2_4 | 455 | 477 | 1.3e-23 | 81.5 | 0.00051 | 0.63 | 10.5 |
| pfu_aug1.0_6248.1_02195.t1 | 8 | 2 | zf-C2H2_jaz | 455 | 475 | 4.2e-10 | 39.4 | 0.02 | 25.0 | 5.1 |
| pfu_aug1.0_6248.1_02195.t1 | 8 | 2 | zf-met | 456 | 474 | 1.4e-09 | 37.8 | 0.018 | 22.0 | 5.4 |
| pfu_aug1.0_6248.1_02195.t1 | 7 | 2 | zf-H2C2_2 | 469 | 493 | 7.2e-36 | 120.7 | 2.8e-10 | 3.4e-07 | 30.2 |
| pfu_aug1.0_6248.1_02195.t1 | 7 | 2 | zf-C2H2_6 | 482 | 506 | 3.5e-10 | 39.4 | 3.0e-07 | 0.00037 | 20.2 |
| pfu_aug1.0_6248.1_02195.t1 | 8 | 3 | zf-met | 483 | 503 | 1.4e-09 | 37.8 | 0.016 | 20.0 | 5.5 |
| pfu_aug1.0_6248.1_02195.t1 | 8 | 3 | zf-C2H2 | 483 | 505 | 3.7e-30 | 102.4 | 8.2e-08 | 0.0001 | 22.4 |
| pfu_aug1.0_6248.1_02195.t1 | 8 | 3 | zf-C2H2_4 | 483 | 505 | 1.3e-23 | 81.5 | 2.2e-07 | 0.00028 | 21.0 |
| pfu_aug1.0_6248.1_02195.t1 | 8 | 3 | zf-C2H2_jaz | 483 | 503 | 4.2e-10 | 39.4 | 0.0036 | 4.5 | 7.5 |
| pfu_aug1.0_6248.1_02195.t1 | 7 | 3 | zf-H2C2_2 | 497 | 520 | 7.2e-36 | 120.7 | 1.8e-08 | 2.3e-05 | 24.4 |
| pfu_aug1.0_6248.1_02195.t1 | 8 | 4 | zf-C2H2_jaz | 510 | 529 | 4.2e-10 | 39.4 | 0.0082 | 10.0 | 6.4 |
| pfu_aug1.0_6248.1_02195.t1 | 8 | 4 | zf-met | 510 | 532 | 1.4e-09 | 37.8 | 0.0011 | 1.4 | 9.2 |
| pfu_aug1.0_6248.1_02195.t1 | 8 | 4 | zf-C2H2 | 510 | 532 | 3.7e-30 | 102.4 | 1.4e-06 | 0.0017 | 18.5 |
| pfu_aug1.0_6248.1_02195.t1 | 8 | 4 | zf-C2H2_4 | 510 | 532 | 1.3e-23 | 81.5 | 0.0001 | 0.13 | 12.6 |
| pfu_aug1.0_6248.1_02195.t1 | 7 | 3 | zf-C2H2_6 | 510 | 520 | 3.5e-10 | 39.4 | 0.0041 | 5.1 | 7.1 |
| pfu_aug1.0_6248.1_02195.t1 | 7 | 4 | zf-H2C2_2 | 525 | 547 | 7.2e-36 | 120.7 | 1.4e-07 | 0.00017 | 21.6 |
| pfu_aug1.0_6248.1_02195.t1 | 7 | 4 | zf-C2H2_6 | 537 | 560 | 3.5e-10 | 39.4 | 0.00019 | 0.23 | 11.4 |
| pfu_aug1.0_6248.1_02195.t1 | 8 | 5 | zf-C2H2_jaz | 538 | 561 | 4.2e-10 | 39.4 | 2.4e-05 | 0.03 | 14.4 |
| pfu_aug1.0_6248.1_02195.t1 | 8 | 5 | zf-met | 538 | 561 | 1.4e-09 | 37.8 | 1.7e-05 | 0.021 | 15.0 |
| pfu_aug1.0_6248.1_02195.t1 | 8 | 5 | zf-C2H2 | 538 | 560 | 3.7e-30 | 102.4 | 1.7e-07 | 0.00021 | 21.4 |
| pfu_aug1.0_6248.1_02195.t1 | 8 | 5 | zf-C2H2_4 | 538 | 560 | 1.3e-23 | 81.5 | 1.2e-06 | 0.0015 | 18.7 |
| pfu_aug1.0_6248.1_02195.t1 | 7 | 5 | zf-H2C2_2 | 552 | 576 | 7.2e-36 | 120.7 | 9.2e-09 | 1.1e-05 | 25.4 |
| pfu_aug1.0_6248.1_02195.t1 | 7 | 5 | zf-C2H2_6 | 565 | 588 | 3.5e-10 | 39.4 | 1.1e-07 | 0.00013 | 21.7 |
| pfu_aug1.0_6248.1_02195.t1 | 8 | 6 | zf-C2H2_jaz | 566 | 586 | 4.2e-10 | 39.4 | 0.00042 | 0.52 | 10.5 |
| pfu_aug1.0_6248.1_02195.t1 | 8 | 6 | zf-C2H2 | 566 | 588 | 3.7e-30 | 102.4 | 2.6e-05 | 0.032 | 14.5 |
| pfu_aug1.0_6248.1_02195.t1 | 8 | 6 | zf-C2H2_4 | 566 | 588 | 1.3e-23 | 81.5 | 4.0e-05 | 0.05 | 13.9 |
| pfu_aug1.0_6248.1_02195.t1 | 8 | 6 | zf-met | 567 | 585 | 1.4e-09 | 37.8 | 0.00045 | 0.55 | 10.5 |
| pfu_aug1.0_6248.1_02195.t1 | 7 | 6 | zf-H2C2_2 | 581 | 604 | 7.2e-36 | 120.7 | 2.0e-08 | 2.5e-05 | 24.3 |
| pfu_aug1.0_6248.1_02195.t1 | 7 | 6 | zf-C2H2_6 | 593 | 606 | 3.5e-10 | 39.4 | 0.024 | 30.0 | 4.6 |
| pfu_aug1.0_6248.1_02195.t1 | 8 | 7 | zf-C2H2_jaz | 594 | 614 | 4.2e-10 | 39.4 | 0.00016 | 0.2 | 11.8 |
| pfu_aug1.0_6248.1_02195.t1 | 8 | 7 | zf-met | 594 | 614 | 1.4e-09 | 37.8 | 0.0011 | 1.3 | 9.3 |
| pfu_aug1.0_6248.1_02195.t1 | 8 | 7 | zf-C2H2 | 594 | 616 | 3.7e-30 | 102.4 | 3.6e-07 | 0.00045 | 20.3 |
| pfu_aug1.0_6248.1_02195.t1 | 8 | 7 | zf-C2H2_4 | 594 | 616 | 1.3e-23 | 81.5 | 0.00011 | 0.14 | 12.5 |
| pfu_aug1.0_6248.1_02195.t1 | 7 | 7 | zf-H2C2_2 | 608 | 632 | 7.2e-36 | 120.7 | 3.2e-09 | 4.0e-06 | 26.8 |
| pfu_aug1.0_6248.1_02195.t1 | 8 | 8 | zf-C2H2_jaz | 622 | 637 | 4.2e-10 | 39.4 | 0.031 | 38.0 | 4.5 |
| pfu_aug1.0_6248.1_02195.t1 | 8 | 8 | zf-met | 622 | 642 | 1.4e-09 | 37.8 | 0.003 | 3.7 | 7.8 |
| pfu_aug1.0_6248.1_02195.t1 | 8 | 8 | zf-C2H2 | 622 | 644 | 3.7e-30 | 102.4 | 3.0e-06 | 0.0037 | 17.5 |
| pfu_aug1.0_6248.1_02195.t1 | 8 | 8 | zf-C2H2_4 | 622 | 644 | 1.3e-23 | 81.5 | 1.4e-06 | 0.0017 | 18.5 |
| pfu_aug1.0_6248.1_02195.t1 | 7 | 7 | zf-C2H2_6 | 622 | 644 | 3.5e-10 | 39.4 | 0.0022 | 2.7 | 8.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6248.1_02195.t1 | gi|260799939|ref|XP_002594908.1| | hypothetical protein BRAFLDRAFT_110776 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_6248.1_02195.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6248.1_02195.t1 atggcaaattcaaagaactctactctaccgacaagaccaaaaactgcacatgctgtagatccaaaaccttctttgaaaaa ctatgtgttcacagataagcttggaagtggaacttatgccacagtgtacaaagctttcaagaggtggggaaatcggcaaa gtgtcgccattaaatgtgtgaagaaaaacagtttgaataaggcttccacagaaaatcttctcacggaaatcggtctactg aaaaagctgaatcatccacatattgtaactttgtatgattttttatgggatgacttttatatctatatcatcatggaata ttgcagcggaggtgatctgtctcagtttatacgatctaaaagatctctacctgaatacatagtcaagcgctttcttcagc aacttgtgaaggccatgatgtatttaaggtcacacaatgtagcacatatggatcttaagccgcaaaatattcttctcaca gcccctccaaataccaggctcaaaataggcgattttggctttgcgaaacacgtagacttgaatgacgaattgcacatcat gcgcggttcaccactgtatatggcacctgaaataatctgcaaagggaagtatgatccaagagtggacatttggtccattg gtgtaataatgtacgagtgtttgtttggaagagctccgtttgcttcaaaatctttgaaagaacttcaagataaaatctgg gattcaaagccggtggaaattccgtatggtgtctccatatctgaccagtgtcgggatttgttactaaaaatactcaggag agacccagatgaaaggattacatttgatgagtttttccatcatccctttgtcgatttagaacactctccttcaaaggatt gtcttaccaaagccatagacatggtgaaagaggcagtgcaaaacgatgaaaaaggtgactataaaaaagcgcaccctttt ccttcttaccccgcaataaatatgaacatgtatggaaattttgctatgcctttaaacgtccctcatccaatgatgtacat gaatccgaatatgtttgtgcctccggttaacaatggtatgatgccgcataataacgtccctcttaatgctcaacctgatc agttcagtcaaagaccggaaatacctcaacctcacatacctacaacccctcctgaacctcctcagaagtcaaatggtggt gctagcaagaagcagcaacataaagaagaaaaatgctctagctctgtagaagaagacaaaactaacgtagtggaaatata tgaatgtaagatatgcagcaggagattttctcaggtcggtaatttccacaatcatatgaagcttcacagtgaaaaggtgt gcgtgtgcggaatttgtaagcttgaatgtgccgacagttatgaattgcagagacacatgcgtaccacacatactggaaat atgccatacaaatgcaatgaatgtgatcgagagttcagtcagtacaataatctgcgtagacatttgagagttcatagcgg aaagagttacaaatgtcatatttgtggtcgtacctttaatgagattttctatctggagatgcatataggatcccacactg gggagcgtacgtacaagtgtggtgtgtgtaaccttacgtttagggacaacgccgatctgcaaaagcatgttaaaacacac aaggcagaggagctacacacatgtgatgtttgtggaaaatctttcagtaaggcttgtgtcttgagacaacacaaaaaaat gcatttaggaatccgtccatacaaatgtgaggtttgttccaaggcatttatccatcgtcatcatttaacaattcatatgc gcatgcacaccagtagtaagccctatgcttgtaagctttgcaagaaggaatttacgcagaccagccatctgtataaacat cttcgtcagcatgcagtcagtctcggaacggacataagcttggatctcaggaatggctcaagtccaacagtggcagaaat agaggagattttcgagaaaatccaagcctctaatgttggaaatgctgtgcagatgaatagtgacaattttgattctagct cacaagattccgttgataaggaggtggcggaatttacagagagcacagaaaatcagcaatccaagttccataagaaatcc tataataacgaaagcttccataaagatttagaaaattaa |
|
Protein
| Protein ID | pfu_aug1.0_6248.1_02195.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6248.1_02195.t1 MANSKNSTLPTRPKTAHAVDPKPSLKNYVFTDKLGSGTYATVYKAFKRWGNRQSVAIKCVKKNSLNKASTENLLTEIGLL KKLNHPHIVTLYDFLWDDFYIYIIMEYCSGGDLSQFIRSKRSLPEYIVKRFLQQLVKAMMYLRSHNVAHMDLKPQNILLT APPNTRLKIGDFGFAKHVDLNDELHIMRGSPLYMAPEIICKGKYDPRVDIWSIGVIMYECLFGRAPFASKSLKELQDKIW DSKPVEIPYGVSISDQCRDLLLKILRRDPDERITFDEFFHHPFVDLEHSPSKDCLTKAIDMVKEAVQNDEKGDYKKAHPF PSYPAINMNMYGNFAMPLNVPHPMMYMNPNMFVPPVNNGMMPHNNVPLNAQPDQFSQRPEIPQPHIPTTPPEPPQKSNGG ASKKQQHKEEKCSSSVEEDKTNVVEIYECKICSRRFSQVGNFHNHMKLHSEKVCVCGICKLECADSYELQRHMRTTHTGN MPYKCNECDREFSQYNNLRRHLRVHSGKSYKCHICGRTFNEIFYLEMHIGSHTGERTYKCGVCNLTFRDNADLQKHVKTH KAEELHTCDVCGKSFSKACVLRQHKKMHLGIRPYKCEVCSKAFIHRHHLTIHMRMHTSSKPYACKLCKKEFTQTSHLYKH LRQHAVSLGTDISLDLRNGSSPTVAEIEEIFEKIQASNVGNAVQMNSDNFDSSSQDSVDKEVAEFTESTENQQSKFHKKS YNNESFHKDLEN |
|