Gene
| Gene Model ID | pfu_aug1.0_6248.1_02194 |
|---|---|
| Locus | scaffold6248.1 : 89176 ... 118158 : + |
| To GenomeBrowser | scaffold6248.1:89176..118158 |
| Genes list of scaffold | scaffold6248.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_6248.1_02194.t1 | 1 | 1 | Glyco_hydro_38 | 153 | 310 | 7.9e-20 | 71.2 | 4.7e-23 | 1.7e-19 | 70.1 |
| pfu_aug1.0_6248.1_02194.t1 | 1 | 1 | Alpha-mann_mid | 315 | 358 | 1.7e-11 | 44.1 | 1.7e-14 | 6.2e-11 | 42.3 |
| pfu_aug1.0_6248.1_02194.t1 | 2 | 1 | Glyco_hydro_38C | 381 | 460 | 8.9e-26 | 90.7 | 4.4e-10 | 1.6e-06 | 27.2 |
| pfu_aug1.0_6248.1_02194.t1 | 2 | 2 | Glyco_hydro_38C | 476 | 563 | 8.9e-26 | 90.7 | 1.7e-20 | 6.3e-17 | 61.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_6248.1_02194.t1 | gi|292628067|ref|XP_002666837.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_6248.1_02194.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6248.1_02194.t1 atgaagcgttacatggtagtatgggttggaatgttctttgtggtagtgtgtgtgtcactttatctgatgatggagaccgt atcgtctaatatgggaaagtcttctgatataaatacgatccttattgaggagaagatagcaaaaataaagagtgatattc ataagaataaaaacttaatcaatgacataaaggacattgtgcggaaaatgaccagaggtgaccgagaagcggcggaaaaa ttagagaaagttttacgagaaaacctcaatgaagaggaggaggttgacaaaccacaagtacaggttcctgtggtaaaagc cgacgttaaaagtcccgatgtcaagagtaaaggtgctgtgcaagtcagcgagaagacctgtggtttggcagatggaccaa atgccaattctgatgtacagtacttctacatgaaatgtataatttcagattatggcggtgctaccgatatgttctgtcac atgatgccgttttactcatacgacgtcccacacacatgtggcccagagccggcagtatgctgtcaatttgactttgctcg acttgcaccaagcagatacaactgtccatggtccataccaccaaaggctatcgatgataataatgtagcaaaaagagcaa aaatgttgattgaccaatacaagaagaaggcaacactttaccgtagcaatgtcgtattgataccgcttggagatgatttc cgttacgacaagctggaggaatgggacaaacagtacaacaactaccaaaaaatctttgattatttgaagaaaacacctga gttaggagttcaggctgagtttggaacattatctgactatttcaacaaactgtatgaggtcacaggcactgagaaaggga gtcggcctaaagatttccctgtacttagcggagatttcttcacgtacgcggacagggacgaccattactggagtggatac tatacctctcggccattctacaagaattttgatagacttctggagtcaacactcaggtctgctgagatagcattcaccct tgccaaagcccatcaggataaacacaaaacggatgagagcagggaacaccatgattcgctaccagagaaaaatgtcattg ctgtatctagtgatccaactgttgtgttattctacaattcactgggtcatgccagggaacaagtggtcaagattcacgtt tcaagcccacatgtcaaggtcaccgaccctaacggtaacactgtggccacacagactgacccttactggatagacaaaga ggaggcatcacttgaaagatacaagactctgaaaggtcatggcgtgatcagagtagtaaaaggtcctgttatttccgagg ttaccgtcttcatgtcccatgttcagcatgtcgtcagactccataactcaccaggtactgatggtttaactgtggatatc tacaacttggtggatattcgagatcagaccaactttgaaatggggatgaaggtgtcaactgatataaagaataaggaccg agaattctgtagcgatctaaatggattccagatgcagaagcacaagaccctggataagctccctttacaagccaactact accccatgccagctatggcttatatagaagatgatgaacacagattctctttgttgacagctcagtcccttggtgtggct agcttaaagcaagttgaggggccgtgtataaatcttaacgatttactgaaatattcaaacaacatgttacaatacgtgtg ggtcaaggtctccaaaaagagcaacgaaatcaatgtcctacggcatgtaggagatgtcgaaaatgttaaaagtttacgct ggatggacgacgacgacgacggacggacggcgcgctatgacaataggtcacttgaacttcgctcaggtgagctaaaaatc acacggatgtacagcagcaatgcctctaggatgtttacaatgatattactcatttccagttag |
|
Protein
| Protein ID | pfu_aug1.0_6248.1_02194.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_6248.1_02194.t1 MKRYMVVWVGMFFVVVCVSLYLMMETVSSNMGKSSDINTILIEEKIAKIKSDIHKNKNLINDIKDIVRKMTRGDREAAEK LEKVLRENLNEEEEVDKPQVQVPVVKADVKSPDVKSKGAVQVSEKTCGLADGPNANSDVQYFYMKCIISDYGGATDMFCH MMPFYSYDVPHTCGPEPAVCCQFDFARLAPSRYNCPWSIPPKAIDDNNVAKRAKMLIDQYKKKATLYRSNVVLIPLGDDF RYDKLEEWDKQYNNYQKIFDYLKKTPELGVQAEFGTLSDYFNKLYEVTGTEKGSRPKDFPVLSGDFFTYADRDDHYWSGY YTSRPFYKNFDRLLESTLRSAEIAFTLAKAHQDKHKTDESREHHDSLPEKNVIAVSSDPTVVLFYNSLGHAREQVVKIHV SSPHVKVTDPNGNTVATQTDPYWIDKEEASLERYKTLKGHGVIRVVKGPVISEVTVFMSHVQHVVRLHNSPGTDGLTVDI YNLVDIRDQTNFEMGMKVSTDIKNKDREFCSDLNGFQMQKHKTLDKLPLQANYYPMPAMAYIEDDEHRFSLLTAQSLGVA SLKQVEGPCINLNDLLKYSNNMLQYVWVKVSKKSNEINVLRHVGDVENVKSLRWMDDDDDGRTARYDNRSLELRSGELKI TRMYSSNASRMFTMILLISS |
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