Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_61723.1_20306
Locus scaffold61723.1 : 1 ... 3841 : +
To GenomeBrowser scaffold61723.1:1..3841
Genes list of scaffold scaffold61723.1
Synonym pfu_aug2.0_2135.1_18703

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_61723.1_20306.t1 1 1 Apc13p 3 40 2.6e-06 27.3 1.9e-10 2.8e-06 27.1

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
egg-4cell 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_61723.1_20306.t1
Definition-
>pfu_aug1.0_61723.1_20306.t1
gtcccagagatggaattaccagagccggagccggacaacggaccgtccagtgaaactctaaaagaacaagaggctaaatg
gatggatctagcactatccactctacatgaccaacaagcatcgagtacatctcactga

Protein
Protein IDpfu_aug1.0_61723.1_20306.t1
Definition-
>pfu_aug1.0_61723.1_20306.t1
VPEMELPEPEPDNGPSSETLKEQEAKWMDLALSTLHDQQASSTSH

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