Gene
| Gene Model ID | pfu_aug1.0_5691.1_59854 |
|---|---|
| Locus | scaffold5691.1 : 23396 ... 44095 : - |
| To GenomeBrowser | scaffold5691.1:23396..44095 |
| Genes list of scaffold | scaffold5691.1 |
| Synonym | pfu_aug2.0_1298.1_28190 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5691.1_59854.t1 | 4 | 1 | NHL | 190 | 213 | 9.5e-06 | 25.3 | 0.013 | 47.0 | 4.2 |
| pfu_aug1.0_5691.1_59854.t1 | 4 | 2 | NHL | 233 | 252 | 9.5e-06 | 25.3 | 0.0089 | 33.0 | 4.6 |
| pfu_aug1.0_5691.1_59854.t1 | 4 | 3 | NHL | 270 | 285 | 9.5e-06 | 25.3 | 0.0084 | 31.0 | 4.7 |
| pfu_aug1.0_5691.1_59854.t1 | 4 | 4 | NHL | 387 | 406 | 9.5e-06 | 25.3 | 0.00054 | 2.0 | 8.5 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_5691.1_59854.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5691.1_59854.t1 atgtccattcggatcacctcgccctttatttgtaacagcaaggaaaaggtcgaggctgatccgaatgcggcatgtcgtca cagtgacgtcattcggacttctgacgtaaacattgcaaaaggttcaaaggtagaggcgctatttgagtgtttaggggcga acaagtccaagaatgacatgctggaaaagctttcaggcgagaaacattcaagggcaaagaagtctaaacaaaagaaagag gcccttacaaagcagaaagaggaactagaaaagttattgaatgattgcagatttttcctcatgagaggcggcgaagatat gataaaattctatgcagacaaatgcccacgacttacacagttctgttttgactatacagcctcaacaactagttatgaag cgggaatgatagacataccggagattaggaggaccataggcgtcctcaaccttgggacacagatgaagggacctccatta aagacaactctcatcaccttccccgatgacggactgtacgaaacaactgcagaggtagtcctcaggttcaatacctacaa tatcatccaagacataaggacaacatctgctggtgatgcatggatcacagatgaggacagccactatatagtaaagtaca acagtactggaaaggtcctcaaaacattaaacagccattgttacaatgaatgtttcgtaataaacaaagatggcgacttc ctggtgtgcaattactgggacaaacgcataatgaaagtcacggaaaaggacgaagtttctattctcatcgacgaattgcc agctcctccaactggaatttgcatcaaccacgaggacaacatcgtaatatgcatgaaggatcatccatacatccctatct attctgcggatggtaaaacgaaactacaccaaatggatctgaaagagccgagacatatgggggacgaagtagatgaggtc ttcttaaccgatggcaactactgttataagagagccatattccaaatagatagtccctataggattttccagaatcgaag acgggattacatcatcgtggatggcaaataccggtatcagatcgtctgccttgaccagaatggtaaattcaggtggaagt acgtctgccagcagttggaggacgtctacccttacaacatctgctgtacacaagatgacgacatcttggtagcagacgtt gaaactcagagattccacgtgatcaaccaagagggacaattcatgaagtacatcctgtatgatcaactcggattggatga tgcgtgttgcaacaatcaatatctcaatgcacacgaaacaggtgtgagcgttgagtctttattgaatagtaccagtgatt ttgttgaattcttgaaatacaatttatcgcttccatcagaagatattgatgcattactgaactctacaattcatttaaaa gagctccatctaaagaccatgaatatcagttcacttgttaccaaagtctcagaatttatggataatctccaaaagtttta tcagtttcaagaaagtctttatgagatgacagtgtttgccgagaatttacctcaagatgcttgtaacgctacgattgatt tcaatcaagatggagaaaatgttaccatggcaacaaacaacaccacaccccatcctgatgtcgacaatgaaaacaaaaaa gacaaagagaagaaggtagaatgtgcttgccatttcgcaatcagatttgtaataatgaacgaatttgtaataaactag |
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Protein
| Protein ID | pfu_aug1.0_5691.1_59854.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5691.1_59854.t1 MSIRITSPFICNSKEKVEADPNAACRHSDVIRTSDVNIAKGSKVEALFECLGANKSKNDMLEKLSGEKHSRAKKSKQKKE ALTKQKEELEKLLNDCRFFLMRGGEDMIKFYADKCPRLTQFCFDYTASTTSYEAGMIDIPEIRRTIGVLNLGTQMKGPPL KTTLITFPDDGLYETTAEVVLRFNTYNIIQDIRTTSAGDAWITDEDSHYIVKYNSTGKVLKTLNSHCYNECFVINKDGDF LVCNYWDKRIMKVTEKDEVSILIDELPAPPTGICINHEDNIVICMKDHPYIPIYSADGKTKLHQMDLKEPRHMGDEVDEV FLTDGNYCYKRAIFQIDSPYRIFQNRRRDYIIVDGKYRYQIVCLDQNGKFRWKYVCQQLEDVYPYNICCTQDDDILVADV ETQRFHVINQEGQFMKYILYDQLGLDDACCNNQYLNAHETGVSVESLLNSTSDFVEFLKYNLSLPSEDIDALLNSTIHLK ELHLKTMNISSLVTKVSEFMDNLQKFYQFQESLYEMTVFAENLPQDACNATIDFNQDGENVTMATNNTTPHPDVDNENKK DKEKKVECACHFAIRFVIMNEFVIN |
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