Gene
| Gene Model ID | pfu_aug1.0_56465.1_27398 |
|---|---|
| Locus | scaffold56465.1 : 1 ... 4083 : - |
| To GenomeBrowser | scaffold56465.1:1..4083 |
| Genes list of scaffold | scaffold56465.1 |
| Synonym | pfu_aug2.0_485.1_17480 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_56465.1_27398.t1 | 1 | 1 | RWD | 2 | 172 | 6.1e-16 | 58.3 | 8.2e-20 | 1.2e-15 | 57.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_56465.1_27398.t1 | gi|125549555|gb|EAY95377.1| | hypothetical protein OsI_17210 [Oryza sativa Indica Group] | 6.0e-17 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_56465.1_27398.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_56465.1_27398.t1 atattggccttggaatctatatttgaaggtgatggagaggatgaatttcttattcttcaaagacctcctgaagatattga ttttaaaagtgaagatattgatttcaaaagtgaatatgctacagcacaatgcaatgacattcaggaactatttactgtta tgctgaaaatacctgttgctacaagtgatgaggaaatccaggttgacatttgtatgccagtgataactgatacaaagtta gataccaaggatacacaaagactgaaatataatagatcagactcaggtcgaagacttctgggtagttttggagtatcaca cctgacccctttacgtctcgtagcagtattacccccagagtacccctcccatggacccccaaccttcacacttacatcag aatggctgagccacacccagttgggagcactgtgtaaagccctggatgaggtttggagggaatctcttggcttacctata ctctttacatggatagactggctgaaaaataatgctctaag |
|
Protein
| Protein ID | pfu_aug1.0_56465.1_27398.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_56465.1_27398.t1 ILALESIFEGDGEDEFLILQRPPEDIDFKSEDIDFKSEYATAQCNDIQELFTVMLKIPVATSDEEIQVDICMPVITDTKL DTKDTQRLKYNRSDSGRRLLGSFGVSHLTPLRLVAVLPPEYPSHGPPTFTLTSEWLSHTQLGALCKALDEVWRESLGLPI LFTWIDWLKNNAL |
|