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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_55345.1_05575
Locus scaffold55345.1 : 1 ... 4027 : -
To GenomeBrowser scaffold55345.1:1..4027
Genes list of scaffold scaffold55345.1
Synonym pfu_aug2.0_2890.1_02285

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_55345.1_05575.t1 1 1 Methyltransf_23 28 212 5.6e-06 26.1 5.1e-09 8.4e-06 25.5
pfu_aug1.0_55345.1_05575.t1 1 1 Methyltransf_11 29 128 7.5e-10 39.1 7.4e-13 1.2e-09 38.4
pfu_aug1.0_55345.1_05575.t1 1 1 Methyltransf_12 29 126 3.9e-07 30.4 9.5e-10 1.6e-06 28.5

Transcript
Transcript IDpfu_aug1.0_55345.1_05575.t1
Definition-
>pfu_aug1.0_55345.1_05575.t1
atgaacaaccgtggatatcagatggcgaccccaagccctctcttacaggactggttatcatcttatgatggtcagcatcc
cttactggacataggatgtgcatatggtattaacacctacaaggcactagagcttggaatacctacagttagcatggatc
tagagaagaaacacctggatattctcctccaaaatatggataaagaatatcgccatttgtcgacatgtgtgattggagag
cttccatacagcattcccttttccgataattatttttccggaattctttgtgccgaagtaatccattttctcgatggaaa
gagcatagaaacatccatagatctaatttatagaaaacttgttccaaacggaaaatttgttatgacaatggcgtccgaca
aactgcttgagtatatcgataaggatttgcatacaaaattccaggatgaccttgggaatggcatcaaatggccaggagag
atgcttatggatgctgaatttacaaagaaattccaaaacatcattgaaaacgatggaatcagatctgaaatcgaccatat
tttcggaaatcttcttcatttctgttctgtagaacaaataacagaggtgctacaacaccggggatttgggattctgcatg
caaatgttggcgaacatcctggatatgaggatcctgagggcctgggtactgtaccgaaaagaatcttgcttgtcgttgca
caaaaactttaa

Protein
Protein IDpfu_aug1.0_55345.1_05575.t1
Definition-
>pfu_aug1.0_55345.1_05575.t1
MNNRGYQMATPSPLLQDWLSSYDGQHPLLDIGCAYGINTYKALELGIPTVSMDLEKKHLDILLQNMDKEYRHLSTCVIGE
LPYSIPFSDNYFSGILCAEVIHFLDGKSIETSIDLIYRKLVPNGKFVMTMASDKLLEYIDKDLHTKFQDDLGNGIKWPGE
MLMDAEFTKKFQNIIENDGIRSEIDHIFGNLLHFCSVEQITEVLQHRGFGILHANVGEHPGYEDPEGLGTVPKRILLVVA
QKL

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