Gene
| Gene Model ID | pfu_aug1.0_5520.1_59791 |
|---|---|
| Locus | scaffold5520.1 : 4863 ... 15385 : - |
| To GenomeBrowser | scaffold5520.1:4863..15385 |
| Genes list of scaffold | scaffold5520.1 |
| Synonym | pfu_aug2.0_9592.1_09724 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5520.1_59791.t1 | 1 | 1 | AAA | 1 | 117 | 5.3e-08 | 33.1 | 6.8e-11 | 7.8e-08 | 32.5 |
| pfu_aug1.0_5520.1_59791.t1 | 1 | 1 | AAA_2 | 2 | 84 | 2.1e-17 | 63.5 | 1.5e-18 | 1.7e-15 | 57.3 |
| pfu_aug1.0_5520.1_59791.t1 | 2 | 1 | AAA_5 | 2 | 24 | 3.6e-08 | 33.2 | 0.00021 | 0.24 | 11.1 |
| pfu_aug1.0_5520.1_59791.t1 | 2 | 2 | AAA_5 | 51 | 89 | 3.6e-08 | 33.2 | 2.2e-07 | 0.00025 | 20.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5520.1_59791.t1 | gi|327289429|ref|XP_003229427.1| | 2.0e-33 |
Transcript
| Transcript ID | pfu_aug1.0_5520.1_59791.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5520.1_59791.t1 atgctctttctaggatcatctggtataggtaaaacagagctggcaaaacaaacggctaaatacctccataaagatcttaa aaaggtggcaaagtttattggatccccgccaggctacgtgggtcatgaggaagggggacaactcaccaagaggttgacag agttccctaaagctgtggttctatttgatgaagtagagaaagcccaccctgatgtgctgaccattatgttacagctcttt gatgaggtggagaggagagtagtgacccagcttgccatggctcatgagaggaagctgattgataaaggatgtgtgataaa actaacggcttctaacgcggaggacatgacaaaaacggtgaatcaacccgacaaaccggctaccatcaaactacaaatac tacaaaaaggcaaaaaggaggaatttgtggatatagaccttcacacagataaaaatccatttgatcttggctttaagtaa |
|
Protein
| Protein ID | pfu_aug1.0_5520.1_59791.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5520.1_59791.t1 MLFLGSSGIGKTELAKQTAKYLHKDLKKVAKFIGSPPGYVGHEEGGQLTKRLTEFPKAVVLFDEVEKAHPDVLTIMLQLF DEVERRVVTQLAMAHERKLIDKGCVIKLTASNAEDMTKTVNQPDKPATIKLQILQKGKKEEFVDIDLHTDKNPFDLGFK |
|