Gene
| Gene Model ID | pfu_aug1.0_551.1_36582 |
|---|---|
| Locus | scaffold551.1 : 9129 ... 42745 : - |
| To GenomeBrowser | scaffold551.1:9129..42745 |
| Genes list of scaffold | scaffold551.1 |
| Synonym | pfu_aug2.0_1340.1_01555 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_551.1_36582.t1 | 1 | 1 | DUF4600 | 25 | 149 | 1.8e-32 | 112.3 | 3.0e-35 | 1.8e-32 | 112.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_551.1_36582.t1 | gi|260833068|ref|XP_002611479.1| | hypothetical protein BRAFLDRAFT_117200 [Branchiostoma floridae] | 1.0e-30 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_551.1_36582.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_551.1_36582.t1 atgctggagcagtctgcagcagagctaagagccacggtggaagaattggagaaaagatatgacacaattgataatgaagg gaatgagtggaagaccagatttgagacacagcaagaaatgaatgagcagttagaaagacaaattcttatgttacagaata aagtgcaggaagcaaagaccaaccttaaagacgccggaaagacaccacgtgacctcaagaatttcgatgacttgtcagac ccaactggttatcacgtccgtatgttagagaaacagaaaattgtaataggaaatcaactgaaagaaatccaagacagact tgatcatgagtctcaggcatatcacaaagcgaatgatgagcgcaaatcatatgcacttgaaatcaacacgaccaaagggg tcatcagtgagctcgtcaccaagcagaagatgtccagtagccgagagcatcttgagactatccccggatcacggactcca agagccatgggggttcgcaaccgtttcgatgggaattcttacgattttgctttgccttctcgactttga |
|
Protein
| Protein ID | pfu_aug1.0_551.1_36582.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_551.1_36582.t1 MLEQSAAELRATVEELEKRYDTIDNEGNEWKTRFETQQEMNEQLERQILMLQNKVQEAKTNLKDAGKTPRDLKNFDDLSD PTGYHVRMLEKQKIVIGNQLKEIQDRLDHESQAYHKANDERKSYALEINTTKGVISELVTKQKMSSSREHLETIPGSRTP RAMGVRNRFDGNSYDFALPSRL |
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