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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_5501.1_59777
Locus scaffold5501.1 : 9426 ... 13796 : +
To GenomeBrowser scaffold5501.1:9426..13796
Genes list of scaffold scaffold5501.1
Synonym pfu_aug2.0_830.1_01165

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_5501.1_59777.t1 gi|291230115|ref|XP_002735014.1| 5.0e-16

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 2
>Adult tissues
Dshape 1

Transcript
Transcript IDpfu_aug1.0_5501.1_59777.t1
Definition-
>pfu_aug1.0_5501.1_59777.t1
atgtctcggcaagactcggacagttccgccgattctctgctggatcagatctccgcgttcgaaaaacttctgcgtcatgc
aatggcgcgttcttccaaagagaggctctacgacatgttacagacggttcagatagaaatgactaactctgtgcgttacc
caaagtcagctcggacagccggcgaagcgaataagccgtcgacggctccgattataaaagtaaagtccgtgtcacaggtc
agatcgactgtaaagtcgatagagaagaaaggcgaaaagtcgtggacggataaagaacgtcaggcaatcaaatatttcga
cgtctttcagaaggacgtcaattacctcagcgatcttaaaaagtacttcacggaaaacattcactcagtgctactgaaag
actacttcgatcccgccgaccgcgtgaaaaagccctctacggcaagatcggatattagcaccggaagtgggcgtggtctg
aacagcagaagcaacagcaagaacaacatcaaagtcgctaagaagtcgcaaacaacgacaaacaagaatgaccatcagca
ggagaaagtgcgactttccgagctcataacggaaatggacgatataacgtcgaagtggtccggacttcttgccgatcgag
aactcaatatagaggactttgacccagatagtcaacacgagttgatgcagttttcaaattttgcgacgttcgaagccgtt
cngatggaagcacgtgacgaacgcgtgaacgatttgaccaatgactttgaatcgatggactcgaagcttcaatcggcgca
agaagaatacacaaatttcctctcagaacgacaacggacaatcgatgagatcagtcgagtccctcggggttctgatcagc
actatgatctcatgaaacgcgcaaatagtatggatctcgaaatacaaaagaagcaagggcagctgcgaatgatggaattc
gagaaatctgtcttgcaagaagattaccttctggaattggaactccgtccgtcgtttatacatttcctcggagacataca
gcagcaagttctggacataaaagaggacattagtcaaaaacaattggagaaatctcatcttgagaaacaattgtctgtac
tcaaaacaaacacggataaaatgaagaaggaaatggcaaaatatctcaacgaagaagaaagcaacgagttttcccgccaa
ctttccgagttaacaaaaggaatagaggaagatttacgcgatatcgatattaagaatcttgaaactgacaggtcctttgt
ttccgaatcagacgatgttgatcttgatgaatatttgaccggaaacaaatttgagaacatttactcaggttctatacgaa
aatcggaaaaggaagtcagccatattagaccaagaaaagaaccagaaagaaaatccgttgttaagaattctgtcagtgtc
aaatccaacaaaagtttgaaatag

Protein
Protein IDpfu_aug1.0_5501.1_59777.t1
Definition-
>pfu_aug1.0_5501.1_59777.t1
MSRQDSDSSADSLLDQISAFEKLLRHAMARSSKERLYDMLQTVQIEMTNSVRYPKSARTAGEANKPSTAPIIKVKSVSQV
RSTVKSIEKKGEKSWTDKERQAIKYFDVFQKDVNYLSDLKKYFTENIHSVLLKDYFDPADRVKKPSTARSDISTGSGRGL
NSRSNSKNNIKVAKKSQTTTNKNDHQQEKVRLSELITEMDDITSKWSGLLADRELNIEDFDPDSQHELMQFSNFATFEAV
XMEARDERVNDLTNDFESMDSKLQSAQEEYTNFLSERQRTIDEISRVPRGSDQHYDLMKRANSMDLEIQKKQGQLRMMEF
EKSVLQEDYLLELELRPSFIHFLGDIQQQVLDIKEDISQKQLEKSHLEKQLSVLKTNTDKMKKEMAKYLNEEESNEFSRQ
LSELTKGIEEDLRDIDIKNLETDRSFVSESDDVDLDEYLTGNKFENIYSGSIRKSEKEVSHIRPRKEPERKSVVKNSVSV
KSNKSLK

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