Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_546.1_07553
Locus scaffold546.1 : 13836 ... 31578 : +
To GenomeBrowser scaffold546.1:13836..31578
Genes list of scaffold scaffold546.1
Synonym pfu_aug2.0_1545.1_18393

Manual annotation
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
trochophore 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_546.1_07553.t1
Definition-
>pfu_aug1.0_546.1_07553.t1
atgtattcggattcggttcatagtctgctgacaccgaatcatatcagtgctttaaatttcacctcatatacactccagaa
cagactcgacaattttcaacaaaaagccatcattgcctatatttcgcgtcgacgagaagagattaaatcttatgtgaagt
ctgatgtcaacttggagaactgtcttctgcatgttagccgttggctgactagtaagatagtcaatcagatgcttgtttcg
tatgttgctgtatcattccgataccagcacttaccaagtatgtctagtgaggagaaggaaagagatataggtgaaggagt
actttctccagaggaaataaggaggaggagacttgcctattttcaaacaattggaaaagatgaagctgtcagtgggcaaa
aagaaacgactctatccacagcagccagtaaaactcaagaaaataatcttggtttgaaacaagagagatggagagatttt
accaaaacctcgggagagaaaccactgaagatccaggtgccatcagatcaagaactttttcattttctgacgagaaatga
tgctgacaaggtgccgaataggaaaactaggtctcctgatagatccgaagaacagaccaggcgttcaaaagtagaaaatg
aatctccacggcatgttcctgtcatagatggcggtaaatcaaaacaacacagtcctaaggtacacagggattccaatgtt
gagccagatgaattcttacagcttagggaagaactgaaaacaatggttagggatgataatgaggaattatatgattcaaa
agtcgagaggctaattcagcttactaaaaatgaaattgctcaaagagaaaaatattcagaaaaatcatcagctagaatag
aaaagagtaaaagttcttatgatggtgatcaaagagaggattcagggccgaaagagaagagagaaggtcagagaagaaaa
ggatttggagaaaaggtaaatagatctcattttgaagaaccaaagaaagttgatcaagtagaggaatttttcgtaaaagg
aaaagacagtggacgtgtgaagtctagaacaatgaagatgtcgctaatggagtcacaggaggatggctctgttttatttc
agaaatcacttaactttgctacggctgaagaacttggtctgtcaactcacagaggggacacagaaagggaggaaactctg
cttcagtcaccttcacagaggagggaatctccaagggtgttacaggaatatgagaatgaaggtttcagaaatgcattagg
agatagaaaatatcaggaattcctacacaaatctatgaaagaaattgatcatttgaatgacaaaaggcataatccatcaa
agtctaaacaagagacctctaaaggtgtatcagaggcaccaaggaaggaaagtgaagatttgtcaaggacatcacagtca
aaaggacagagaaaagtcgcctctgttccgggtgtgtcaaagtcaagctcttggactgagcaaaaacagcgaggtcagtc
acatgatcttaggttaaatttacaggacatgagccacatgcctgttgcggatgaccatcatagtcaggagggaggtgtta
atatacctagactgaacaggcctcgtcacgaacctaccaacatttaccatgacaacgaggagccagagctgatgagttta
cctccctctgtcagacaggaaaggccggcaatgatgcgtaacgtagtattctccacatctcagatctaccagcaggcatt
tagggaacagtttgctcagatgatgccttggcagggtggaccccctggtaccagtcccccttctatgatacctacacctg
gcaggggatattatggcagtagtccaaatgtgtaccagtccatgcaatatcctggaagccctttcactggtattccacca
agcagtccaggattttatccaccacagtctgctgccatggcaactccaccacagcacatgatacctcatccaccaagtgg
aaatgtctatccaccatataattacgtgatgccccctggtggacagaacagaatctcacatgtgatgtatgaaggaggag
ataacccatatcaccaacaactcagctcgagaagccagcagtcaaatgatggtattcaagattacgtacatgtactgttt
aatcagaaacagtaa

Protein
Protein IDpfu_aug1.0_546.1_07553.t1
Definition-
>pfu_aug1.0_546.1_07553.t1
MYSDSVHSLLTPNHISALNFTSYTLQNRLDNFQQKAIIAYISRRREEIKSYVKSDVNLENCLLHVSRWLTSKIVNQMLVS
YVAVSFRYQHLPSMSSEEKERDIGEGVLSPEEIRRRRLAYFQTIGKDEAVSGQKETTLSTAASKTQENNLGLKQERWRDF
TKTSGEKPLKIQVPSDQELFHFLTRNDADKVPNRKTRSPDRSEEQTRRSKVENESPRHVPVIDGGKSKQHSPKVHRDSNV
EPDEFLQLREELKTMVRDDNEELYDSKVERLIQLTKNEIAQREKYSEKSSARIEKSKSSYDGDQREDSGPKEKREGQRRK
GFGEKVNRSHFEEPKKVDQVEEFFVKGKDSGRVKSRTMKMSLMESQEDGSVLFQKSLNFATAEELGLSTHRGDTEREETL
LQSPSQRRESPRVLQEYENEGFRNALGDRKYQEFLHKSMKEIDHLNDKRHNPSKSKQETSKGVSEAPRKESEDLSRTSQS
KGQRKVASVPGVSKSSSWTEQKQRGQSHDLRLNLQDMSHMPVADDHHSQEGGVNIPRLNRPRHEPTNIYHDNEEPELMSL
PPSVRQERPAMMRNVVFSTSQIYQQAFREQFAQMMPWQGGPPGTSPPSMIPTPGRGYYGSSPNVYQSMQYPGSPFTGIPP
SSPGFYPPQSAAMATPPQHMIPHPPSGNVYPPYNYVMPPGGQNRISHVMYEGGDNPYHQQLSSRSQQSNDGIQDYVHVLF
NQKQ

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495