Gene
| Gene Model ID | pfu_aug1.0_5450.1_23793 |
|---|---|
| Locus | scaffold5450.1 : 1 ... 51423 : - |
| To GenomeBrowser | scaffold5450.1:1..51423 |
| Genes list of scaffold | scaffold5450.1 |
| Synonym | pfu_aug2.0_2023.1_11982 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5450.1_23793.t1 | 4 | 1 | Motile_Sperm | 20 | 75 | 6.4e-06 | 25.7 | 8.5e-07 | 0.0063 | 16.1 |
| pfu_aug1.0_5450.1_23793.t1 | 4 | 2 | Motile_Sperm | 239 | 291 | 6.4e-06 | 25.7 | 0.0029 | 21.0 | 4.7 |
| pfu_aug1.0_5450.1_23793.t1 | 4 | 3 | Motile_Sperm | 378 | 410 | 6.4e-06 | 25.7 | 0.75 | 5600.0 | -3.0 |
| pfu_aug1.0_5450.1_23793.t1 | 4 | 4 | Motile_Sperm | 475 | 499 | 6.4e-06 | 25.7 | 0.063 | 470.0 | 0.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_5450.1_23793.t1 | gi|260791508|ref|XP_002590771.1| | hypothetical protein BRAFLDRAFT_121927 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_5450.1_23793.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5450.1_23793.t1 atattgaaataatttttggtattcatcttttggtgtaccctacccagccagttttagaactagaacctgaagtcaacttt ggaaatctagtagcaaacagcaagactgtatcaaaggaaatagcgttaacaaaccatggatcaaaatcaggagaattcaa aattaagtacagtggtgacaaacctattgtcatcatgccaagcagtggatcagttcctcctaaaagtgttcaacttatta agggagttgatttgactcgcagtacagtggatgccctagctaacgagggggatgtcgagaaagagaaatcacctggatgc accaatgtcataacgtcccttgtgactgccattccaaaccagggtgcattcaagccaaagcagttattggatgtgattgg tcaagttgctgataacaggaatcccactgttgctcatctacaaattatacattcctacccaatacatctctctggatcta gtgaccctatacctgtcaaacgaaatgctaaatttaatccaggtactgttgatgcatacaaagatctagactgtgaagtt gtatggcatccgtcatacttagctcctgaggatggctcattctccctgatgattcatggtgggcagacgcttcaactcag gtgtagagcagagttagggtcagctaatgtacaatttgtagagagaagaatcatgtttggccagactcctatcaacatta ctacaactagaactgctctgttagcaaacactggacaaaatcacgcttatttccaggttatggattgtaaccctttccca ggactatcagtgactccaacccatggagtggtccctgtaggtggacatgcagaactcaaggtgcagctaacaccatctgc catcttgaaatttgacactcgtgttcaagtagccattaaaggtggcaagacattggaacttagaatgggaggaacagtag aaccgccaagtgttgacattgatgtggtggctgcttatgactttatcatgcctgtaattatcaatcagatcggagcccct acccctgctcctacccccttccctccaacacctgcaccctccaacaaaaacagtcttcaacatattatcaatccccgtcc catgccacctcaggtggttactccacgtaaacatgtcattgccacagctctacgtcagccactacaactctcaacaaaca aagtggaatttgccttaccatctacattcattgatccaacagcttctacaggattaggagtgacaaagggaactgtttta gtaaataacagtgacaagcccttgaagtggatgtttgatttaagtgctaagatcagagtcctggaagaaggcattctgaa gtttacacacccctcaggagctccttttgttgtcatgggaacagaagaaagcaaaggaatagagggtacactggatcctg gacaaaaacaggatatttctatagcattttgtccaaaggagcctgggaaacatgaatgcttaatcccaatcattctgaat gataatattggcaaaccttaccagtacctacagatcatagctgaaatgaagtctcctaaaatctggtttgaccccttggc tatcgtgatgacaccagtacctctccttactgaggtggccacagagtttaccatactggctgcccaatatacagagttcc agttaatggtcactgctacatctgacaactgtttactgacatgttatcctttcttggccttacatagaactgatcatcag attgtgtgtgaacagtcctacatcgaccaaacttgcatggatgatgcatctgaagatgcttacaacaatacatgatgcca gggtgcgtgtgcagcctctgtaaaaccggagtacctgctggaaccaagggactaccatctgtggaagcagatgcagaaac aacttaagatggagtttgaaaagcaagaagaggtacaaggaatcaatccaggagaggagcagattaatctatttggagat gaagaagaagagctagaggaggatgtgtttgaggcggtctccaaaagggcgtggactgatgtacttctacaacttctcaa gataaaaacccatctacaggacatgtacacacatccatcgacagctgagcagtgtctacataatgcactgaaagtggtaa atgccatgagatatgctggaatagactatgacattcagcatatgacggacacagagttacatcgacgcttagttaccggt accattaacacatgcagcgttacatctaaaaccattaccttactctcaagtaatgctacaaacagcataaaacaagccaa ggctatcccaccaagtggtgtgagctacactgtggaatgtgactcagaattctacaagattcccaagaggatgtccttcc ctgtcccaggggggaggtcccacagtgctcctgtcatgcataacggtaaggatgcatgtacagcattaccagtgtcattc tgtgctaatgagcctggtcactacccatgtcaaatagttctccgagccaatgatgatatacgtgtgtataaactggaatg tacagtcaacccagagggaagcactgctgagtttgaattccaggctccggtacaccagtctgtaactcaggaaattccta ttgtgaatatgaccaatcatgattggccactgaaagccagaatagagggaccgggcttttttggacctccccttatccta gccaaagcctataacagtacaaactatccactcattttcaaaccacagaacgaatcccttgtacag |
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Protein
| Protein ID | pfu_aug1.0_5450.1_23793.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5450.1_23793.t1 IEIIFGIHLLVYPTQPVLELEPEVNFGNLVANSKTVSKEIALTNHGSKSGEFKIKYSGDKPIVIMPSSGSVPPKSVQLIK GVDLTRSTVDALANEGDVEKEKSPGCTNVITSLVTAIPNQGAFKPKQLLDVIGQVADNRNPTVAHLQIIHSYPIHLSGSS DPIPVKRNAKFNPGTVDAYKDLDCEVVWHPSYLAPEDGSFSLMIHGGQTLQLRCRAELGSANVQFVERRIMFGQTPINIT TTRTALLANTGQNHAYFQVMDCNPFPGLSVTPTHGVVPVGGHAELKVQLTPSAILKFDTRVQVAIKGGKTLELRMGGTVE PPSVDIDVVAAYDFIMPVIINQIGAPTPAPTPFPPTPAPSNKNSLQHIINPRPMPPQVVTPRKHVIATALRQPLQLSTNK VEFALPSTFIDPTASTGLGVTKGTVLVNNSDKPLKWMFDLSAKIRVLEEGILKFTHPSGAPFVVMGTEESKGIEGTLDPG QKQDISIAFCPKEPGKHECLIPIILNDNIGKPYQYLQIIAEMKSPKIWFDPLAIVMTPVPLLTEVATEFTILAAQYTEFQ LMVTATSDNCLLTCYPFLALHRTDHQIVCEQSYIDQTCMDDASEDAYNNTXCQGACAASVKPEYLLEPRDYHLWKQMQKQ LKMEFEKQEEVQGINPGEEQINLFGDEEEELEEDVFEAVSKRAWTDVLLQLLKIKTHLQDMYTHPSTAEQCLHNALKVVN AMRYAGIDYDIQHMTDTELHRRLVTGTINTCSVTSKTITLLSSNATNSIKQAKAIPPSGVSYTVECDSEFYKIPKRMSFP VPGGRSHSAPVMHNGKDACTALPVSFCANEPGHYPCQIVLRANDDIRVYKLECTVNPEGSTAEFEFQAPVHQSVTQEIPI VNMTNHDWPLKARIEGPGFFGPPLILAKAYNSTNYPLIFKPQNESLVQ |
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