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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_5338.1_09095
Locus scaffold5338.1 : 6056 ... 43630 : +
To GenomeBrowser scaffold5338.1:6056..43630
Genes list of scaffold scaffold5338.1
Synonym pfu_aug2.0_1835.1_18562

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_5338.1_09095.t1 1 1 SEFIR 45 144 4.4e-06 26.8 1.2e-09 5.8e-06 26.4

Transcript
Transcript IDpfu_aug1.0_5338.1_09095.t1
Definition-
>pfu_aug1.0_5338.1_09095.t1
atgataattctggaggacttcttaaagcggcagaacaattcagtccgtgtactgcgtgatgccctgctgtccatcgaccg
cgatgatgctttacgtgttttattagacgctcttccagtagccaggcctttgaaagcgttcgtgactttcgcctgtgatt
ctgatcagcacctccgtatggtggtcaacatgacgttatgtctggagaggaacggagcacgagctgccatggatatgttc
cactacactatgccgactgatgacaaaataggatggatccgaaggatgtacgcagaggctgaggtgatcatggtttgtat
ttctccacaatatctgatccaggctgaccctctgatgacaaatgtgacggtgaacggtaacggtctccacacgtcactta
tctaccgtatgatccggagggagattgagcaccaaattgccattgacttccgatatttggattgcaatatcccatcataa

Protein
Protein IDpfu_aug1.0_5338.1_09095.t1
Definition-
>pfu_aug1.0_5338.1_09095.t1
MIILEDFLKRQNNSVRVLRDALLSIDRDDALRVLLDALPVARPLKAFVTFACDSDQHLRMVVNMTLCLERNGARAAMDMF
HYTMPTDDKIGWIRRMYAEAEVIMVCISPQYLIQADPLMTNVTVNGNGLHTSLIYRMIRREIEHQIAIDFRYLDCNIPS

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