Gene
| Gene Model ID | pfu_aug1.0_532.1_65502 |
|---|---|
| Locus | scaffold532.1 : 41836 ... 47885 : - |
| To GenomeBrowser | scaffold532.1:41836..47885 |
| Genes list of scaffold | scaffold532.1 |
| Synonym | pfu_aug2.0_1120.1_01399 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_532.1_65502.t1 | 1 | 1 | VWA | 44 | 176 | 2.6e-08 | 33.7 | 1.4e-11 | 5.1e-08 | 32.8 |
| pfu_aug1.0_532.1_65502.t1 | 4 | 1 | TSP_1 | 209 | 259 | 5.3e-33 | 112.9 | 3.3e-14 | 1.2e-10 | 41.2 |
| pfu_aug1.0_532.1_65502.t1 | 4 | 2 | TSP_1 | 266 | 314 | 5.3e-33 | 112.9 | 3.4e-11 | 1.3e-07 | 31.6 |
| pfu_aug1.0_532.1_65502.t1 | 4 | 3 | TSP_1 | 322 | 366 | 5.3e-33 | 112.9 | 1.6e-06 | 0.0058 | 16.7 |
| pfu_aug1.0_532.1_65502.t1 | 4 | 4 | TSP_1 | 380 | 426 | 5.3e-33 | 112.9 | 2.0e-14 | 7.3e-11 | 42.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| trochophore | 3 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_532.1_65502.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_532.1_65502.t1 atgttcttttacatgagccttatcacgttacacgtcaaatgtaatggccgctgtagtaaaactgtagacttaattgtact agttgaatcatccaataaaactgccttctctcatggcgagacacaaacatggcacccggccatctcactcttcctggatg gtttattccactctctggacatcggagaaaatggcttccgtgtagccgtcatcctgtatagtacgtcaattgatgacgtc atgacatttgctgtcgatagacagtttgctcatcatggaatttcgtatctacggcccaaatatggaagtgctaatttgca tattggtctggcagaaatgaacaggataattagatattattcccgccctggtgtaaccagacgagccgtgatcgtcagcg ggtctcatttcctgtatcccaccgatattctctctgaagtgtggcgttctaagatgttgaatatagatatggccgccatc ggctttggggcagaggccaatgaaaacgaaatcagacaaatcgccggtgacttcgtgattactatagatgatatagggat gttgtatgccctagtaaagagagtgaccgacaggctgtgcatagaacccattgatggtcaatggtcgcattggttacaat ggacatcgtgctcagcttcatgtgagggcggctacagaacgcgcatgcgcgaatgcaataatccagagcccaagtacggc ggaaagaactgtagaggatcaaattcagatacatttatctgtaatatgggaccttgcaatgttgaatttcctcagtctga gtggtccagctggggagattgttcaagttcttgcgggaagggacaggaagtgaggtcacgaatttgttcatccaccaatc atgtgcactgtaacaacctgggtattgaaacagatgtacgtgaatgcaccaaagcaccttgtccacacccagagggagtt tggtctgaatggtcacagtggtccacatgtgactgtaaatctcaaacagctaatcgaacgcgcacctgcaagtcccaaag tccggggaatggtagacaagactgtcagggattcagtcgtgctgttatagcttgtgattccagtatgaaccctgagtgtc ctgtggatgggcattggtcagattggtcatcgtggagcacttgttccgtaacatgtggaaccggaagtagacggcggaac aggaaatgtgacaactcagtaccggagaatggcggaaaagactgtaacggagttaaaactgaaattttagattgcgactc tcttgttatttgcaatgaatgcatggctctaacgtcagacattggcccgcaatggtacgacctacatatttttggagcct ggattccacaaagatgtcaaggaaaccaaattttctctcagtctttgtgtgactgtgtacgtcctaggcacgatgcttcc ttgttcagagactgccgtttgatgtttcatctaaattttcatacttctccggaggaagacgagatgaattctcactcacg ttaccatatgagagggaccatctttgactccgtcgattataatatccatggtgacggcgtattcagacaaaattccagag ttattctttggcaatttcacgacattgactggaaattcaatgtggatatttttatgcgtgttaaaccggaagtaaatcta tcgccatcaccggtgacattactaactgacggcgactgttctacgttagatgtcagtccgtcattacttatagctttaga ttatcgtttgaatccaaatacagttactgttatgtttggactttcgttagaggatagacataatatgttatacataaata tttcaacaaaggttgacgatttcattgatatacacttaacatacaaaggcacaaatttcggaggagttgtaaatggaagg aaatctgaaattaacttcgaaaagccagcgaccgtcaagagacaccctggaccgttgacaataggaaaaagcatgtgtgc attagacaacccaggcttctccgggcttataaaagaggtcgatttcttcaagtgctag |
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Protein
| Protein ID | pfu_aug1.0_532.1_65502.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_532.1_65502.t1 MFFYMSLITLHVKCNGRCSKTVDLIVLVESSNKTAFSHGETQTWHPAISLFLDGLFHSLDIGENGFRVAVILYSTSIDDV MTFAVDRQFAHHGISYLRPKYGSANLHIGLAEMNRIIRYYSRPGVTRRAVIVSGSHFLYPTDILSEVWRSKMLNIDMAAI GFGAEANENEIRQIAGDFVITIDDIGMLYALVKRVTDRLCIEPIDGQWSHWLQWTSCSASCEGGYRTRMRECNNPEPKYG GKNCRGSNSDTFICNMGPCNVEFPQSEWSSWGDCSSSCGKGQEVRSRICSSTNHVHCNNLGIETDVRECTKAPCPHPEGV WSEWSQWSTCDCKSQTANRTRTCKSQSPGNGRQDCQGFSRAVIACDSSMNPECPVDGHWSDWSSWSTCSVTCGTGSRRRN RKCDNSVPENGGKDCNGVKTEILDCDSLVICNECMALTSDIGPQWYDLHIFGAWIPQRCQGNQIFSQSLCDCVRPRHDAS LFRDCRLMFHLNFHTSPEEDEMNSHSRYHMRGTIFDSVDYNIHGDGVFRQNSRVILWQFHDIDWKFNVDIFMRVKPEVNL SPSPVTLLTDGDCSTLDVSPSLLIALDYRLNPNTVTVMFGLSLEDRHNMLYINISTKVDDFIDIHLTYKGTNFGGVVNGR KSEINFEKPATVKRHPGPLTIGKSMCALDNPGFSGLIKEVDFFKC |
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