Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_532.1_65501
Locus scaffold532.1 : 17006 ... 40875 : +
To GenomeBrowser scaffold532.1:17006..40875
Genes list of scaffold scaffold532.1
Synonym pfu_aug2.0_1120.1_01398

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_532.1_65501.t1 gi|335295957|ref|XP_003130465.2| 3.0e-18

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_532.1_65501.t1
Definition-
>pfu_aug1.0_532.1_65501.t1
atggttatggcagataaaagcatcaacgataccaatattcgtaatgggaggaggtcgagatgtgcgacaccaaacgatta
ttcagaggatagcagcgatgattctgatcacggggtcagaaagtatggtaaggacttccaggccatagctgatgtgatcg
gcaataaaacagacttccacatccgtagtttctttgtgaatttccgtagacgatataacctggatgaggtactggccgag
tacgaagcagaacatgggatagagtccagtaagacagacaacatactcaaggatgaagataagattactgccacagcaga
gaactattttgcagcagcctccaccattgattcgcccaaacagctcgtctcctgctaa

Protein
Protein IDpfu_aug1.0_532.1_65501.t1
Definition-
>pfu_aug1.0_532.1_65501.t1
MVMADKSINDTNIRNGRRSRCATPNDYSEDSSDDSDHGVRKYGKDFQAIADVIGNKTDFHIRSFFVNFRRRYNLDEVLAE
YEAEHGIESSKTDNILKDEDKITATAENYFAAASTIDSPKQLVSC

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