Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_532.1_65499
Locus scaffold532.1 : 1 ... 2922 : +
To GenomeBrowser scaffold532.1:1..2922
Genes list of scaffold scaffold532.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_532.1_65499.t1 1 1 Med24_N 1 85 3.0e-13 48.2 2.2e-17 3.3e-13 48.1

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues
maleGonad 1
pearlSac 1

Transcript
Transcript IDpfu_aug1.0_532.1_65499.t1
Definition-
>pfu_aug1.0_532.1_65499.t1
ccaacctgatgcggctaatgaatgccgtgtgccaggaacagaagttatgtccacgtatcagttttataatcagctttatc
aatgaagcccttaaatgcggcagccagtattcacgttatattctacagtttatgcctcctcaaatggtatcgacagtcat
gaagagcgtacctggtgtgtttgacaatcagcagatccttcatatatgtgatcttactacgtcaacagggaggaaagtgg
cagctaaagccgtgtgtcaaaactccaaactacgcaaaataatatactga

Protein
Protein IDpfu_aug1.0_532.1_65499.t1
Definition-
>pfu_aug1.0_532.1_65499.t1
NLMRLMNAVCQEQKLCPRISFIISFINEALKCGSQYSRYILQFMPPQMVSTVMKSVPGVFDNQQILHICDLTTSTGRKVA
AKAVCQNSKLRKIIY

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