Gene
| Gene Model ID | pfu_aug1.0_5277.1_38109 |
|---|---|
| Locus | scaffold5277.1 : 32917 ... 38505 : - |
| To GenomeBrowser | scaffold5277.1:32917..38505 |
| Genes list of scaffold | scaffold5277.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5277.1_38109.t1 | 2 | 1 | zf-H2C2_2 | 5 | 14 | 2.3e-07 | 30.7 | 0.091 | 54.0 | 4.3 |
| pfu_aug1.0_5277.1_38109.t1 | 2 | 1 | zf-C2H2 | 6 | 27 | 2.8e-08 | 33.6 | 7.3e-07 | 0.00043 | 20.4 |
| pfu_aug1.0_5277.1_38109.t1 | 2 | 1 | zf-C2H2_jaz | 6 | 24 | 9.9e-06 | 25.5 | 0.0011 | 0.66 | 10.1 |
| pfu_aug1.0_5277.1_38109.t1 | 2 | 1 | zf-C2H2_4 | 7 | 27 | 1.6e-09 | 37.3 | 1.9e-06 | 0.0011 | 19.1 |
| pfu_aug1.0_5277.1_38109.t1 | 2 | 2 | zf-H2C2_2 | 19 | 44 | 2.3e-07 | 30.7 | 3.9e-10 | 2.3e-07 | 30.7 |
| pfu_aug1.0_5277.1_38109.t1 | 2 | 2 | zf-C2H2_4 | 33 | 56 | 1.6e-09 | 37.3 | 2.4e-08 | 1.4e-05 | 25.0 |
| pfu_aug1.0_5277.1_38109.t1 | 2 | 2 | zf-C2H2 | 33 | 56 | 2.8e-08 | 33.6 | 1.5e-07 | 8.7e-05 | 22.6 |
| pfu_aug1.0_5277.1_38109.t1 | 2 | 2 | zf-C2H2_jaz | 33 | 52 | 9.9e-06 | 25.5 | 2.0e-05 | 0.012 | 15.7 |
Transcript
| Transcript ID | pfu_aug1.0_5277.1_38109.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5277.1_38109.t1 atggatggcaggataacgtgtaatgtttgtaagaagacactgtcacattacaggaatctgaagcgacatatgatgactca taccaactaccgaccattcatctgtgacgtctgttctaagacattctcaagaaaagatcgcctgaaagatcacgtgactc gaatgcacgtgaaccgcactatacctaaagcagttaaaaagaaagaatccagtgggaaatccattgaaacatactgtcat aaattgtga |
|
Protein
| Protein ID | pfu_aug1.0_5277.1_38109.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5277.1_38109.t1 MDGRITCNVCKKTLSHYRNLKRHMMTHTNYRPFICDVCSKTFSRKDRLKDHVTRMHVNRTIPKAVKKKESSGKSIETYCH KL |
|