Gene
| Gene Model ID | pfu_aug1.0_5167.1_52471 |
|---|---|
| Locus | scaffold5167.1 : 10376 ... 23935 : - |
| To GenomeBrowser | scaffold5167.1:10376..23935 |
| Genes list of scaffold | scaffold5167.1 |
| Synonym | pfu_aug2.0_2334.1_15487 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_5167.1_52471.t1 | 2 | 1 | AA_permease_2 | 16 | 195 | 3.0e-20 | 72.1 | 8.4e-21 | 3.1e-17 | 62.2 |
| pfu_aug1.0_5167.1_52471.t1 | 2 | 2 | AA_permease_2 | 216 | 251 | 3.0e-20 | 72.1 | 2.5e-05 | 0.093 | 11.2 |
Transcript
| Transcript ID | pfu_aug1.0_5167.1_52471.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5167.1_52471.t1 atggaatcaccagagattacgtcaacgtttacggtgaagcggaggttaggggttaccagcgctgtagcctttcttatcag cagtatgattggttcaggtatattcatttctccaacaggggtgtaccgtaatacacagtccgtcggtctgtgtctgctga tatggaccatttgtggactaactgccttagccggactactagtaccaaagacaggtggagactatagttactataagagg acatttggtaacttccctgcgttctggtacgtgtggtcccaatgcctggtggtctatccagtgtcaaatgtcatcaagtc actgaccatagcagaatacgccgctggagccgtctttgatgaatgcggtccaccagaattattaaaacggctgtttgcaa taacactcattgtgacatttaccattatcaatgtagttaatgtagatctagcagctcgaacccaggttctctttgccacg gtaaaaattggtggtctggctgtcatagcaggaagcggactgtacgtcattagtaaaggtaaatttggtacccttaccac aggattcagtgggtctacatcagatttgtcagacgttgtggctgccatgaaaactatcaattttagtatagaggaggtca ttcaccctaaaagaataatatttgctggagctagagatggtaacttcgtagagttcttttccttcatcgacgtgaaatcc agaatacctacaccctccatttttcttgttaatttcatgacaccttacaggaagcaagtacacaaggtcctctacaaaga ttgtgtttatcgtgccgatcgtttaacaaatatggccgccgagggctctgattggcagacacattttttatttctcctct gcaaccgctgcacagaattttataaaaccttacaggaagcaagtactcaacatcctcttcgaagtttgtgtttttcgtgc cgatcggtcaacaaatatggccgccgagggctctga |
|
Protein
| Protein ID | pfu_aug1.0_5167.1_52471.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_5167.1_52471.t1 MESPEITSTFTVKRRLGVTSAVAFLISSMIGSGIFISPTGVYRNTQSVGLCLLIWTICGLTALAGLLVPKTGGDYSYYKR TFGNFPAFWYVWSQCLVVYPVSNVIKSLTIAEYAAGAVFDECGPPELLKRLFAITLIVTFTIINVVNVDLAARTQVLFAT VKIGGLAVIAGSGLYVISKGKFGTLTTGFSGSTSDLSDVVAAMKTINFSIEEVIHPKRIIFAGARDGNFVEFFSFIDVKS RIPTPSIFLVNFMTPYRKQVHKVLYKDCVYRADRLTNMAAEGSDWQTHFLFLLCNRCTEFYKTLQEASTQHPLRSLCFSC RSVNKYGRRGL |
|