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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_5121.1_01903
Locus scaffold5121.1 : 1 ... 3891 : +
To GenomeBrowser scaffold5121.1:1..3891
Genes list of scaffold scaffold5121.1
Synonym pfu_aug2.0_429.1_30748

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_5121.1_01903.t1 9 1 LRR_9 14 52 3.0e-08 33.4 0.0065 14.0 5.2
pfu_aug1.0_5121.1_01903.t1 12 1 LRR_4 16 53 0.0 263.4 1.1e-12 2.4e-09 36.6
pfu_aug1.0_5121.1_01903.t1 13 1 LRR_8 16 55 0.0 192.8 5.8e-09 1.2e-05 24.9
pfu_aug1.0_5121.1_01903.t1 24 1 LRR_1 16 35 1.4e-40 131.0 7.7e-05 0.16 12.0
pfu_aug1.0_5121.1_01903.t1 21 1 LRR_7 16 31 3.4e-24 80.6 0.00024 0.51 10.7
pfu_aug1.0_5121.1_01903.t1 13 2 LRR_8 38 96 0.0 192.8 3.0e-11 6.5e-08 32.2
pfu_aug1.0_5121.1_01903.t1 21 2 LRR_7 38 53 3.4e-24 80.6 0.0027 5.8 7.5
pfu_aug1.0_5121.1_01903.t1 24 2 LRR_1 39 53 1.4e-40 131.0 0.0042 8.9 6.7
pfu_aug1.0_5121.1_01903.t1 9 2 LRR_9 40 99 3.0e-08 33.4 0.0075 16.0 5.0
pfu_aug1.0_5121.1_01903.t1 12 2 LRR_4 63 101 0.0 263.4 5.7e-10 1.2e-06 27.9
pfu_aug1.0_5121.1_01903.t1 24 3 LRR_1 63 83 1.4e-40 131.0 0.0028 6.0 7.3
pfu_aug1.0_5121.1_01903.t1 9 3 LRR_9 66 140 3.0e-08 33.4 0.00096 2.0 7.9
pfu_aug1.0_5121.1_01903.t1 21 3 LRR_7 84 100 3.4e-24 80.6 0.013 27.0 5.5
pfu_aug1.0_5121.1_01903.t1 24 4 LRR_1 85 103 1.4e-40 131.0 0.008 17.0 5.9
pfu_aug1.0_5121.1_01903.t1 13 3 LRR_8 108 165 0.0 192.8 1.3e-11 2.8e-08 33.4
pfu_aug1.0_5121.1_01903.t1 24 5 LRR_1 109 129 1.4e-40 131.0 0.00071 1.5 9.1
pfu_aug1.0_5121.1_01903.t1 9 4 LRR_9 111 149 3.0e-08 33.4 0.0022 4.6 6.7
pfu_aug1.0_5121.1_01903.t1 21 4 LRR_7 111 123 3.4e-24 80.6 0.15 320.0 2.3
pfu_aug1.0_5121.1_01903.t1 12 3 LRR_4 112 146 0.0 263.4 1.5e-09 3.2e-06 26.6
pfu_aug1.0_5121.1_01903.t1 24 6 LRR_1 131 148 1.4e-40 131.0 0.2 420.0 1.6
pfu_aug1.0_5121.1_01903.t1 21 5 LRR_7 131 145 3.4e-24 80.6 0.035 75.0 4.2
pfu_aug1.0_5121.1_01903.t1 12 4 LRR_4 154 189 0.0 263.4 3.0e-07 0.00063 19.3
pfu_aug1.0_5121.1_01903.t1 13 4 LRR_8 154 187 0.0 192.8 6.7e-05 0.14 11.9
pfu_aug1.0_5121.1_01903.t1 21 6 LRR_7 155 169 3.4e-24 80.6 0.082 170.0 3.1
pfu_aug1.0_5121.1_01903.t1 24 7 LRR_1 155 174 1.4e-40 131.0 0.013 28.0 5.2
pfu_aug1.0_5121.1_01903.t1 21 7 LRR_7 178 192 3.4e-24 80.6 0.017 37.0 5.1
pfu_aug1.0_5121.1_01903.t1 13 5 LRR_8 178 234 0.0 192.8 1.2e-08 2.4e-05 23.9
pfu_aug1.0_5121.1_01903.t1 24 8 LRR_1 178 193 1.4e-40 131.0 0.0037 7.9 6.9
pfu_aug1.0_5121.1_01903.t1 9 5 LRR_9 197 241 3.0e-08 33.4 0.0055 12.0 5.4
pfu_aug1.0_5121.1_01903.t1 12 5 LRR_4 200 238 0.0 263.4 2.2e-10 4.6e-07 29.3
pfu_aug1.0_5121.1_01903.t1 13 6 LRR_8 200 257 0.0 192.8 1.5e-09 3.2e-06 26.7
pfu_aug1.0_5121.1_01903.t1 21 8 LRR_7 201 214 3.4e-24 80.6 0.065 140.0 3.4
pfu_aug1.0_5121.1_01903.t1 24 9 LRR_1 201 221 1.4e-40 131.0 0.0014 3.0 8.2
pfu_aug1.0_5121.1_01903.t1 21 9 LRR_7 224 238 3.4e-24 80.6 0.03 63.0 4.4
pfu_aug1.0_5121.1_01903.t1 24 10 LRR_1 224 243 1.4e-40 131.0 0.025 53.0 4.4
pfu_aug1.0_5121.1_01903.t1 12 6 LRR_4 246 284 0.0 263.4 1.8e-09 3.8e-06 26.4
pfu_aug1.0_5121.1_01903.t1 13 7 LRR_8 246 303 0.0 192.8 1.4e-09 2.9e-06 26.9
pfu_aug1.0_5121.1_01903.t1 21 10 LRR_7 247 261 3.4e-24 80.6 0.43 910.0 0.9
pfu_aug1.0_5121.1_01903.t1 9 6 LRR_9 247 304 3.0e-08 33.4 2.8e-05 0.059 12.9
pfu_aug1.0_5121.1_01903.t1 24 11 LRR_1 247 267 1.4e-40 131.0 0.00088 1.9 8.8
pfu_aug1.0_5121.1_01903.t1 21 11 LRR_7 270 284 3.4e-24 80.6 0.00089 1.9 9.0
pfu_aug1.0_5121.1_01903.t1 13 8 LRR_8 270 325 0.0 192.8 2.9e-09 6.2e-06 25.8
pfu_aug1.0_5121.1_01903.t1 24 12 LRR_1 270 288 1.4e-40 131.0 4.6e-05 0.097 12.7
pfu_aug1.0_5121.1_01903.t1 21 12 LRR_7 291 307 3.4e-24 80.6 0.013 28.0 5.5
pfu_aug1.0_5121.1_01903.t1 12 7 LRR_4 292 330 0.0 263.4 8.0e-10 1.7e-06 27.4
pfu_aug1.0_5121.1_01903.t1 24 13 LRR_1 292 313 1.4e-40 131.0 0.0013 2.7 8.3
pfu_aug1.0_5121.1_01903.t1 9 7 LRR_9 312 373 3.0e-08 33.4 0.0022 4.6 6.7
pfu_aug1.0_5121.1_01903.t1 13 9 LRR_8 315 371 0.0 192.8 9.7e-11 2.1e-07 30.6
pfu_aug1.0_5121.1_01903.t1 21 13 LRR_7 316 330 3.4e-24 80.6 0.037 79.0 4.1
pfu_aug1.0_5121.1_01903.t1 24 14 LRR_1 317 335 1.4e-40 131.0 0.011 24.0 5.4
pfu_aug1.0_5121.1_01903.t1 21 14 LRR_7 339 353 3.4e-24 80.6 0.49 1000.0 0.7
pfu_aug1.0_5121.1_01903.t1 12 8 LRR_4 339 376 0.0 263.4 9.9e-09 2.1e-05 24.0
pfu_aug1.0_5121.1_01903.t1 24 15 LRR_1 339 359 1.4e-40 131.0 0.0019 4.1 7.8
pfu_aug1.0_5121.1_01903.t1 21 15 LRR_7 362 376 3.4e-24 80.6 0.15 320.0 2.3
pfu_aug1.0_5121.1_01903.t1 24 16 LRR_1 362 381 1.4e-40 131.0 0.0099 21.0 5.6
pfu_aug1.0_5121.1_01903.t1 12 9 LRR_4 383 421 0.0 263.4 5.5e-09 1.2e-05 24.8
pfu_aug1.0_5121.1_01903.t1 21 16 LRR_7 384 399 3.4e-24 80.6 0.4 840.0 1.0
pfu_aug1.0_5121.1_01903.t1 13 10 LRR_8 384 439 0.0 192.8 9.1e-09 1.9e-05 24.2
pfu_aug1.0_5121.1_01903.t1 24 17 LRR_1 385 403 1.4e-40 131.0 0.00064 1.4 9.2
pfu_aug1.0_5121.1_01903.t1 9 8 LRR_9 388 467 3.0e-08 33.4 0.0021 4.5 6.8
pfu_aug1.0_5121.1_01903.t1 24 18 LRR_1 407 426 1.4e-40 131.0 0.069 150.0 3.0
pfu_aug1.0_5121.1_01903.t1 12 10 LRR_4 429 467 0.0 263.4 5.4e-10 1.1e-06 28.0
pfu_aug1.0_5121.1_01903.t1 13 11 LRR_8 430 482 0.0 192.8 2.8e-08 5.9e-05 22.7
pfu_aug1.0_5121.1_01903.t1 21 17 LRR_7 431 445 3.4e-24 80.6 0.2 420.0 1.9
pfu_aug1.0_5121.1_01903.t1 24 19 LRR_1 431 449 1.4e-40 131.0 0.0057 12.0 6.3
pfu_aug1.0_5121.1_01903.t1 21 18 LRR_7 453 465 3.4e-24 80.6 0.0096 20.0 5.9
pfu_aug1.0_5121.1_01903.t1 24 20 LRR_1 454 472 1.4e-40 131.0 0.00097 2.1 8.7
pfu_aug1.0_5121.1_01903.t1 21 19 LRR_7 500 516 3.4e-24 80.6 0.0079 17.0 6.1
pfu_aug1.0_5121.1_01903.t1 13 12 LRR_8 500 558 0.0 192.8 4.6e-08 9.8e-05 22.0
pfu_aug1.0_5121.1_01903.t1 12 11 LRR_4 501 536 0.0 263.4 5.4e-06 0.011 15.2
pfu_aug1.0_5121.1_01903.t1 24 21 LRR_1 501 518 1.4e-40 131.0 0.0068 14.0 6.1
pfu_aug1.0_5121.1_01903.t1 9 9 LRR_9 522 581 3.0e-08 33.4 0.0038 8.1 5.9
pfu_aug1.0_5121.1_01903.t1 24 22 LRR_1 524 544 1.4e-40 131.0 0.21 440.0 1.6
pfu_aug1.0_5121.1_01903.t1 12 12 LRR_4 546 581 0.0 263.4 2.7e-09 5.8e-06 25.7
pfu_aug1.0_5121.1_01903.t1 13 13 LRR_8 547 585 0.0 192.8 2.0e-07 0.00042 20.0
pfu_aug1.0_5121.1_01903.t1 24 23 LRR_1 548 568 1.4e-40 131.0 0.00011 0.22 11.6
pfu_aug1.0_5121.1_01903.t1 21 20 LRR_7 549 562 3.4e-24 80.6 0.0049 10.0 6.8
pfu_aug1.0_5121.1_01903.t1 21 21 LRR_7 569 583 3.4e-24 80.6 0.00081 1.7 9.1
pfu_aug1.0_5121.1_01903.t1 24 24 LRR_1 570 583 1.4e-40 131.0 0.046 98.0 3.6

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_5121.1_01903.t1 gi|291231680|ref|XP_002735791.1| 0.0

Transcript
Transcript IDpfu_aug1.0_5121.1_01903.t1
Definition- 
>pfu_aug1.0_5121.1_01903.t1
caatcgagcaattacctcatttcctgaaggagttaccaactacgactctctgaacactctcgtcttgtcaaataatcagc
tgaccgaattacccaatgaaataggacaatttcctcacctggaaactttgattttgtcacacaacaagcttcggacgata
aatcgggcagtttatctaaattacgagctgagattgctggacatttctgaaaatgaagtatccgtgatttctccagatat
ttcaagcttgacaaagctgcaagagttggtcgccaatagcaaccacatagaagagcttccgccgaggattggagaaatgg
aagagttgtcgttattagttctgagtgataatcagatacgcaaaatccctgattccatacaaaaattaaggaatcttaaa
gtgctggcactagaacgaaatgcattggaatatttgaaccccgaggtgtgcaaaattgaagaattagtacggcttggtct
atctggaaaccatattgcaaatttacctcgcgaggtagagaatttcgtcgccctcgaagagctttatctagatgataatg
agtttgaatttattcccgtgcaggtcctttggttggacacattgcatacgctagtgatgtccggaaatcgtctgcgtcag
atccaacctgaaatagcaaatcttaagggactggcagtgttgggactgaataataacgaaatagaggcaatacccgaaga
actctgcaatattgaaggtctggaaattcttggacttgaaaacaacaagatttcaagaattccagacaacattgctaatt
tgtacgagctacgggaactctatcttgggaacaatgacattgaaacaatcccagaaaatttgtgctggtgttcaaatctt
gagattctgagtctcttaaataacaaaatatcagaattccccgtcgagatagaaaatttacgccgtgttcacactctagt
cttgtcaagcaacaaattcaagaagctcccggaagcgctggggactttacatgatcttgagattctgtcagcagacgaca
accagctgtctgatataccgtcagacgtttccggactgaggcatatccaacaactcagtttgagtaaaaatgcattcaca
aaatttccagtttctgtatgctccctgaagacacttgaaattttagatctccggaaaaacgagattccggaaattccgtc
tagaatcgcggagcttgatcgtctgacgtccttgtacatgggtaataacgtcgtcaacaatttcataccggagttatgcg
gcatgacggaactccagcttttagaccttgccaataacatcgtcgaggaaattcctgaggcaatttctcagatgaccgga
cttgaggatctggatatttcccacaatcgtttcctggaatttccgaaatctgttttggctttggaaaaattggagcgact
caccttcgaccaatcagaaggacatccggttccttcacttccggatgaaatcgaattttcaaatttgtcctacctaattg
tgtcaaataacactctgcgcactttaccgaatacaataaatggcatgaaaaatatcaaatctatcgtcgcaagcttcaat
gaaatcagtatattgccgaaatcaatctgtgacttgacacaaattgaaattcttcatcttaatgacaacaaactgacgtc
acttcctgaaaactttgatcgtctgagcaatttgaaagatcttcgtctccataacaaccccctgagaactccaccaatgg
acgtctgtgttagtggcgtggtccagccaataggaagattcattcgaagggctgtagaaagagagggtaaaattaatttc
gtcatttatataatggatgtgattggataa

Protein
Protein IDpfu_aug1.0_5121.1_01903.t1
Definition- 
>pfu_aug1.0_5121.1_01903.t1
NRAITSFPEGVTNYDSLNTLVLSNNQLTELPNEIGQFPHLETLILSHNKLRTINRAVYLNYELRLLDISENEVSVISPDI
SSLTKLQELVANSNHIEELPPRIGEMEELSLLVLSDNQIRKIPDSIQKLRNLKVLALERNALEYLNPEVCKIEELVRLGL
SGNHIANLPREVENFVALEELYLDDNEFEFIPVQVLWLDTLHTLVMSGNRLRQIQPEIANLKGLAVLGLNNNEIEAIPEE
LCNIEGLEILGLENNKISRIPDNIANLYELRELYLGNNDIETIPENLCWCSNLEILSLLNNKISEFPVEIENLRRVHTLV
LSSNKFKKLPEALGTLHDLEILSADDNQLSDIPSDVSGLRHIQQLSLSKNAFTKFPVSVCSLKTLEILDLRKNEIPEIPS
RIAELDRLTSLYMGNNVVNNFIPELCGMTELQLLDLANNIVEEIPEAISQMTGLEDLDISHNRFLEFPKSVLALEKLERL
TFDQSEGHPVPSLPDEIEFSNLSYLIVSNNTLRTLPNTINGMKNIKSIVASFNEISILPKSICDLTQIEILHLNDNKLTS
LPENFDRLSNLKDLRLHNNPLRTPPMDVCVSGVVQPIGRFIRRAVEREGKINFVIYIMDVIG

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